RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RIPK2O43353 540 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 PLRG1O43660 514 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 RNGTTO60942 597 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 USP12O75317 370 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 GCATO75600 419 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 TTC4O95801 387 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 SYF2O95926 243 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 MT-CO1P00395 513 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 APOEP02649 317 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 SRPRAP08240 638 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 C1SP09871 688 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 GIMD1P0DJR0 217 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 PECAM1P16284 738 aaPredicted RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 IL4RP24394 825 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 ACP1P24666 158 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 FDFT1P37268 417 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 MAGEA6P43360 314 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 VPS41P49754 854 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 GABREP78334 506 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 SFSWAPQ12872 951 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 DPYSQ14117 519 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 STAT4Q14765 748 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 TRADDQ15628 312 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 UAP1Q16222 522 aaPredicted RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 KRT71Q3SY84 523 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 RNASEH2BQ5TBB1 312 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 OTUD1Q5VV17 481 aaPredicted RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 KIAA1614Q5VZ46 1190 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 NCBP2-AS2Q69YL0 99 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 CXorf57Q6NSI4 855 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 ARHGEF18Q6ZSZ5 1173 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 TAOK1Q7L7X3 1001 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 C14orf80Q86SX3 495 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 CCDC25Q86WR0 208 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 LRRC49Q8IUZ0 686 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 PQLC3Q8N755 202 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 MFSD2AQ8NA29 543 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 ATP11CQ8NB49 1132 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 SKA1Q96BD8 255 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 LRRC39Q96DD0 335 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 PGM2Q96G03 612 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 ATP6V1G3Q96LB4 118 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 SERPINB12Q96P63 405 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 OLFM3Q96PB7 478 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 RBM15Q96T37 977 aaKnown RBP eCLIP7.89□□□□□ -1.15
VMP1-204ENST00000587259 PRR14Q9BWN1 585 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 TKTL2Q9H0I9 626 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 CDC42EP4Q9H3Q1 356 aaKnown RBP7.89□□□□□ -1.15
VMP1-204ENST00000587259 HAUS2Q9NVX0 235 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 ARHGEF38Q9NXL2 777 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 FETUBQ9UGM5 382 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 U3KQA8 63 aa7.89□□□□□ -1.15
VMP1-204ENST00000587259 TDRD6O60522 2096 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 MAST4O15021 2626 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 HECTD1Q9ULT8 2610 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 A0A1W2PQU0 124 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 TYW5A2RUC4 315 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 ERI2A8K979 691 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 E7EVH7 732 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 J3QKU1 62 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 AGRPO00253 132 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 KLK10O43240 276 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 CREB3O43889 395 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 SNAP91O60641 907 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 CSO75390 466 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 TCEA3O75764 348 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 AGTP01019 485 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 GSTA2P09210 222 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 THEGLP0DJG4 465 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 TFE3P19532 575 aaPredicted RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 TPSB2P20231 275 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 BASP1P80723 227 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 ZNF844Q08AG5 666 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 ELAVL3Q14576 367 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 RASA2Q15283 850 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 TRIP13Q15645 432 aaPredicted RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 TPSAB1Q15661 275 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 DLG2Q15700 870 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 CA9Q16790 459 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 GLIPR1L2Q4G1C9 344 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 DNAJC21Q5F1R6 531 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 TPRG1LQ5T0D9 272 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 PIP5KL1Q5T9C9 394 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 SEL1L3Q68CR1 1132 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 ITPRIPL1Q6GPH6 555 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 TIGD7Q6NT04 549 aaPredicted RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 FBXL22Q6P050 247 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 FOXR1Q6PIV2 292 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 LINGO4Q6UY18 593 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 PRPF39Q86UA1 669 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 ZC3H18Q86VM9 953 aaKnown RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 CCDC117Q8IWD4 279 aaPredicted RBP7.88□□□□□ -1.15
VMP1-204ENST00000587259 SLC22A18ASQ8N1D0 253 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 ATP6V0D2Q8N8Y2 350 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 NAT8LQ8N9F0 302 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 FAM71DQ8N9W8 422 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 CHST14Q8NCH0 376 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 MCUQ8NE86 351 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 GRIN3AQ8TCU5 1115 aa7.88□□□□□ -1.15
VMP1-204ENST00000587259 HTR3CQ8WXA8 447 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms