RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 IGLV3-19P01714 112 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 PRNPP04156 253 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 UGT2B4P06133 528 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ATXN1LP0C7T5 689 aaKnown RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 C5AR1P21730 350 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 PSMA3P25788 255 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 OAS2P29728 719 aaKnown RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 ABL2P42684 1182 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 SLC18A1P54219 525 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 POLR2LP62875 67 aaKnown RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 BCL2L1Q07817 233 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 SKIDA1Q1XH10 827 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ANKRD20A4Q4UJ75 823 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 PIP5KL1Q5T9C9 394 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ARMC12Q5T9G4 340 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ZDHHC20Q5W0Z9 365 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 BRAT1Q6PJG6 821 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ADGRD1Q6QNK2 874 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 KIAA1324Q6UXG2 1013 aaKnown RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 GDPD4Q6W3E5 623 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 PARS2Q7L3T8 475 aaKnown RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 CCDC91Q7Z6B0 441 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 CNTN4Q8IWV2 1026 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 MPP5Q8N3R9 675 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 RYBPQ8N488 228 aaPredicted RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
VMP1-202ENST00000585847 BRSK1Q8TDC3 778 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 TLCD1Q96CP7 247 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 KLHL32Q96NJ5 620 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 PAFAH2Q99487 392 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 SUV39H2Q9H5I1 410 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 EURLQ9NYK6 297 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 ZFATQ9P243 1243 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 MBD1Q9UIS9 605 aaPredicted RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 CORO1CQ9ULV4 474 aaPredicted RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 PCDHGC4Q9Y5F7 938 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 RAI2Q9Y5P3 530 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 IGHV1OR15-9A0A0B4J2B8 117 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 A0A1W2PP55 124 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 MROH6A6NGR9 719 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 C2orf81A6NN90 581 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 AXIN1O15169 862 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 AVILO75366 819 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 ADH1BP00325 375 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 SHBGP04278 402 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 PDHA1P08559 390 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 TIMP2P16035 220 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 SSTR1P30872 391 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 P2RY2P41231 377 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 TPMTP51580 245 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 TAS2R38P59533 333 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 ACVR1Q04771 509 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 CNTN1Q12860 1018 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 ZNF528Q3MIS6 628 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 AGBL4Q5VU57 503 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 HDDC3Q8N4P3 179 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
VMP1-202ENST00000585847 CFAP36Q96G28 342 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 PWWP2AQ96N64 755 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 SMIM14Q96QK8 99 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 LYSMD1Q96S90 227 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 CPNE1Q99829 537 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 MAGEE1Q9HCI5 957 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 TREX1Q9NSU2 369 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 DKK3Q9UBP4 350 aa12.65□□□□□ -0.38
VMP1-202ENST00000585847 SMG5Q9UPR3 1016 aaKnown RBP12.65□□□□□ -0.38
VMP1-202ENST00000585847 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.39
VMP1-202ENST00000585847 MYLKQ15746 1914 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 C16orf96A6NNT2 1141 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 C1QTNF3-AMACRE9PGA6 284 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 KPNA3O00505 521 aaPredicted RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 HRO43593 1189 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 RNASEH1O60930 286 aaKnown RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 PGLSO95336 258 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 DNTTP04053 509 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 SDHBP21912 280 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 BCKDHBP21953 392 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 ITGB7P26010 798 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 GP5P40197 560 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 GRIA1P42261 906 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 PTPRRQ15256 657 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 TAF1AQ15573 450 aaPredicted RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 RSPO4Q2I0M5 234 aaPredicted RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 KBTBD12Q3ZCT8 623 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 AARS2Q5JTZ9 985 aaKnown RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 SIRPB2Q5JXA9 342 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 FAM46CQ5VWP2 391 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 USP30Q70CQ3 517 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms