RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 XPAP23025 273 aaPredicted RBP20.56■□□□□ 0.88
SRSF1-206ENST00000583741 HTR1BP28222 390 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 ELP6Q0PNE2 266 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 PAPD7Q5XG87 772 aaKnown RBP20.56■□□□□ 0.88
SRSF1-206ENST00000583741 CCNJLQ8IV13 435 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 GPR156Q8NFN8 814 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 HES6Q96HZ4 224 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 LOXL2Q9Y4K0 774 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 TSPAN11A1L157 253 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 RASA4BC9J798 803 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 TMX2-CTNND1H3BSU7 103 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 RASA4O43374 803 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 RNF8O76064 485 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 JMJD7P0C870 316 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 LIPCP11150 499 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 EPHB2P29323 1055 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 SUOXP51687 545 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 NFKB2Q00653 900 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 CYTH1Q15438 398 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 UGP2Q16851 508 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 ZSWIM9Q86XI8 627 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 Q8N9G6 341 aaPredicted RBP20.56■□□□□ 0.88
SRSF1-206ENST00000583741 PLA2G15Q8NCC3 412 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 WDR92Q96MX6 357 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 TMEM74Q96NL1 305 aa20.56■□□□□ 0.88
SRSF1-206ENST00000583741 RBM15Q96T37 977 aaKnown RBP eCLIP20.56■□□□□ 0.888e-13■■■□□ 14.6
SRSF1-206ENST00000583741 PRAMEF33A0A0G2JMD5 474 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 NVLO15381 856 aaKnown RBP20.55■□□□□ 0.88
SRSF1-206ENST00000583741 PRAMEF10O60809 474 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 URI1O94763 535 aaPredicted RBP20.55■□□□□ 0.88
SRSF1-206ENST00000583741 PCCBP05166 539 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 MMP12P39900 470 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 ETV5P41161 510 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 SSR1P43307 286 aaKnown RBP20.55■□□□□ 0.88
SRSF1-206ENST00000583741 LIG3P49916 1009 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 SERINC3Q13530 473 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 VASH2Q86V25 355 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 UBL4BQ8N7F7 174 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 OR6C4Q8NGE1 309 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 NCAPGQ9BPX3 1015 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 FAM117AQ9C073 453 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 STARD5Q9NSY2 213 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 SNX12Q9UMY4 172 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 HEMK1Q9Y5R4 338 aaPredicted RBP20.55■□□□□ 0.88
SRSF1-206ENST00000583741 SAR1BQ9Y6B6 198 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 DGKBQ9Y6T7 804 aa20.55■□□□□ 0.88
SRSF1-206ENST00000583741 CCDC66A2RUB6 948 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 LRCH4O75427 683 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 ITGB2P05107 769 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 PRKCGP05129 697 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 FAM87AP0C7U9 286 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 ITGB6P18564 788 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 CTNNA2P26232 953 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 CTNNA1P35221 906 aaKnown RBP20.54■□□□□ 0.88
SRSF1-206ENST00000583741 CSRP3P50461 194 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 ZFP36L1Q07352 338 aaKnown RBP20.54■□□□□ 0.88
SRSF1-206ENST00000583741 AGERQ15109 404 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 CERCAMQ5T4B2 595 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 TMPRSS9Q7Z410 1059 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 SPRED1Q7Z699 444 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 OR1E3Q8WZA6 343 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 SUV39H2Q9H5I1 410 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 FGF22Q9HCT0 170 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 FOXJ2Q9P0K8 574 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 APPL1Q9UKG1 709 aa20.54■□□□□ 0.88
SRSF1-206ENST00000583741 RELNP78509 3460 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 TMEM202A6NGA9 273 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 TCP1P17987 556 aaKnown RBP20.53■□□□□ 0.88
SRSF1-206ENST00000583741 WT1P19544 449 aaPredicted RBP20.53■□□□□ 0.88
SRSF1-206ENST00000583741 YBEYP58557 167 aaPredicted RBP20.53■□□□□ 0.88
SRSF1-206ENST00000583741 TAS2R40P59535 323 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 MTM1Q13496 603 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 ZFAND4Q86XD8 727 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 RHOT1Q8IXI2 618 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 HCAR2Q8TDS4 363 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 OSBPL9Q96SU4 736 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 ARHGAP9Q9BRR9 750 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 MRPL40Q9NQ50 206 aaKnown RBP20.53■□□□□ 0.88
SRSF1-206ENST00000583741 IL17BQ9UHF5 180 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.53■□□□□ 0.88
SRSF1-206ENST00000583741 PCDHGA4Q9Y5G9 962 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 RNF215Q9Y6U7 377 aa20.53■□□□□ 0.88
SRSF1-206ENST00000583741 SDK2Q58EX2 2172 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 DDX3YO15523 660 aaKnown RBP20.52■□□□□ 0.88
SRSF1-206ENST00000583741 PSTPIP1O43586 416 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 TNFP01375 233 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 GLB1P16278 677 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 PCK1P35558 622 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 MARCKSL1P49006 195 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 PARP15Q460N3 678 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 EFHC2Q5JST6 749 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 OGFOD3Q6PK18 319 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 CAMK1DQ8IU85 385 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 SLITRK4Q8IW52 837 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 UMODL1-AS1Q8N2C9 162 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 ARFGAP1Q8N6T3 406 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 FAM46DQ8NEK8 389 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 ATL2Q8NHH9 583 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 KRT35Q92764 455 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 FUBP1Q96AE4 644 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms