RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 C2orf15Q8WU43 125 aaKnown RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 CCDC126Q96EE4 140 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 DEFB118Q96PH6 123 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TMEM175Q9BSA9 504 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 UNC93B1Q9H1C4 597 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 MAGEH1Q9H213 219 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 EML4Q9HC35 981 aaKnown RBP13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 TRPM5Q9NZQ8 1165 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 FAM50BQ9Y247 325 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 PCDHGC4Q9Y5F7 938 aa13.68□□□□□ -0.22
SRSF1-205ENST00000582730 SEC24AO95486 1093 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 NDST3O95803 873 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 KLKB1P03952 638 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 ASLP04424 464 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 CA8P35219 290 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 CDH4P55283 916 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 NSUN2Q08J23 767 aaKnown RBP eCLIP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 GRM2Q14416 872 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 AAGABQ6PD74 315 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 GLT6D1Q7Z4J2 308 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 FBXW8Q8N3Y1 598 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 PAF1Q8N7H5 531 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 SNX31Q8N9S9 440 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 KYQ8NBH2 561 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 TMA16Q96EY4 203 aaKnown RBP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 MPP4Q96JB8 637 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 TNFRSF12AQ9NP84 129 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 ADAMTS6Q9UKP5 1117 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 SPO11Q9Y5K1 396 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 GREB1Q4ZG55 1949 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 CCNT2O60583 730 aaKnown RBP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 KCNC1P48547 511 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 PKNOX1P55347 436 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 MAP7Q14244 749 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 TMCO2Q7Z6W1 182 aaPredicted RBP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 OR4K2Q8NGD2 314 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 CCDC68Q9H2F9 335 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
SRSF1-205ENST00000582730 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
SRSF1-205ENST00000582730 ATP6AP2A0A1C7CYW4 349 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 C2orf78A6NCI8 922 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 SDHDO14521 159 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 HNRNPRO43390 633 aaKnown RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 GPC4O75487 556 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ATP6AP2O75787 350 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PIM1P11309 404 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PEX2P28328 305 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 FMO4P31512 558 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ALDH1A3P47895 512 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 BTKQ06187 659 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CCNIQ14094 377 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ZNF549Q6P9A3 640 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 DSELQ8IZU8 1212 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CEP70Q8NHQ1 597 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 TADA1Q96BN2 335 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PTERQ96BW5 349 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 UBXN10Q96LJ8 280 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CDRT15Q96T59 188 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 NPAS2Q99743 824 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 COMMD8Q9NX08 183 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 A0A0U1RQS6 177 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 SMIM31A0A1B0GVY4 71 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 STC2O76061 302 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 RHOBTB1O94844 696 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PGM3O95394 542 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CRTAMO95727 393 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 DNAJB13P59910 316 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PPP1R3AQ16821 1122 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 MMEL1Q495T6 779 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 FBXO48Q5FWF7 155 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ACBD5Q5T8D3 534 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 C16orf89Q6UX73 402 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 GK5Q6ZS86 529 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 RP9Q8TA86 221 aaKnown RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ZNF296Q8WUU4 475 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 WBP2Q969T9 261 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CDKN2AIPNLQ96HQ2 116 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 MGME1Q9BQP7 344 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 TTLL2Q9BWV7 592 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 TXNDC9O14530 226 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PRRG1O14668 218 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 INSIG1O15503 277 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CLDN11O75508 207 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 GFAPP14136 432 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 TCN1P20061 433 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms