RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 PDGFAP04085 211 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 IVLP07476 585 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 PNMA6AP0CW24 399 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 CYP11B1P15538 503 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 F8A1P23610 371 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 ERCC5P28715 1186 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 SERPINA4P29622 427 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 ADCY8P40145 1251 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 GNPDA1P46926 289 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 PMS2P54278 862 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 STX17P56962 302 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 CTBSQ01459 385 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 CDO1Q16878 200 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 C15orf59Q2T9L4 293 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 PARP15Q460N3 678 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 CCDC14Q49A88 953 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 WDR74Q6RFH5 385 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 STRADAQ7RTN6 431 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 APLFQ8IW19 511 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 FAM114A1Q8IWE2 563 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 CCDC185Q8N715 623 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 MSANTD4Q8NCY6 345 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 OR10G6Q8NH81 332 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 NTAN1Q96AB6 310 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 AHCYL2Q96HN2 611 aaKnown RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 COQ10AQ96MF6 247 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 ATP13A3Q9H7F0 1226 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 SUDS3Q9H7L9 328 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 METTL5Q9NRN9 209 aaKnown RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 KCTD5Q9NXV2 234 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 UBA2Q9UBT2 640 aaPredicted RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 HOOK1Q9UJC3 728 aaKnown RBP8.68□□□□□ -1.02
BRIP1-204ENST00000579028 TLK1Q9UKI8 766 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 SUFUQ9UMX1 484 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 SLC17A4Q9Y2C5 497 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
BRIP1-204ENST00000579028 WASH4PA8MWX3 477 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SORBS2O94875 1100 aaKnown RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 LSM8O95777 96 aaKnown RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 RECKO95980 971 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 FURINP09958 794 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 COL8A1P27658 744 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 TEAD1P28347 426 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 TNFRSF8P28908 595 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 EPHB2P29323 1055 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SDC4P31431 198 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ACTR1BP42025 376 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 PTPN9P43378 593 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 RGRP47804 291 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 HDAC4P56524 1084 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 RIPPLY3P57055 190 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ACTR1AP61163 376 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 POLR2LP62875 67 aaKnown RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 NOMO3P69849 1222 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 CDK3Q00526 305 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 NOTCH2Q04721 2471 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 PAK1Q13153 545 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ERV3-1Q14264 604 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ACOX1Q15067 660 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SRLQ86TD4 932 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ZNF761Q86XN6 746 aaPredicted RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ELOA2Q8IYF1 753 aaPredicted RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 UMODL1-AS1Q8N2C9 162 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SLC37A2Q8TED4 501 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 RXFP2Q8WXD0 754 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 CENPIQ92674 756 aaPredicted RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 CREBBPQ92793 2442 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 NUS1Q96E22 293 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SLC38A3Q99624 504 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ZMYND15Q9H091 742 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SIDT1Q9NXL6 827 aaKnown RBP8.67□□□□□ -1.02
BRIP1-204ENST00000579028 SHANK1Q9Y566 2161 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 ATP6V1DQ9Y5K8 247 aa8.67□□□□□ -1.02
BRIP1-204ENST00000579028 MED13Q9UHV7 2174 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 ESPL1Q14674 2120 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 FAM170AA1A519 330 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 WIPF3A6NGB9 483 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 C2CD4BA6NLJ0 364 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 TRAFD1O14545 582 aaPredicted RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 POLR1CO15160 346 aaPredicted RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 INPP4BO15327 924 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 PRAMEF11O60813 436 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CLDN1O95832 211 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 ANKRD34CP0C6C1 535 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 DLSTP36957 453 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 NOP2P46087 812 aaKnown RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 POLD2P49005 469 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 BCL2L1Q07817 233 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CNGA3Q16281 694 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 SNAP47Q5SQN1 464 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 PHLDB2Q86SQ0 1253 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 PYROXD2Q8N2H3 581 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CBARPQ8N350 705 aaPredicted RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 SFRP1Q8N474 314 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms