RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PHKG1Q16816 387 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 PTPRNQ16849 979 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 OGFRL1Q5TC84 451 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 CYP4Z1Q86W10 505 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ELMO1Q92556 727 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ARIH1Q9Y4X5 557 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 HES2Q9Y543 173 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ULK1O75385 1050 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 TULP3O75386 442 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ENDOD1O94919 500 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ARIH2O95376 493 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 STT3AP46977 705 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 C6orf183Q5T699 404 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 SERPINB11Q96P15 392 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 NEMP2A6NFY4 417 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 WNT10BO00744 389 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 IRF1P10914 325 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 GPD2P43304 727 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 CDC42P60953 191 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 DENND6AQ8IWF6 608 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 KLHL32Q96NJ5 620 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 SPRTNQ9H040 489 aaPredicted RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 CCDC162PA2VCL2 907 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 GSTM1P09488 218 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 IGFBP5P24593 272 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 HIST2H2ACQ16777 129 aaPredicted RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 HIST2H2AA3Q6FI13 130 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 ESRP1Q6NXG1 681 aaKnown RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 DEPDC4Q8N2C3 294 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 CASTOR2A6NHX0 329 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 MAXP61244 160 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 BNC1Q01954 994 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 CNTN1Q12860 1018 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 ERMP1Q7Z2K6 904 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 SELENOMQ8WWX9 145 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 MTFMTQ96DP5 389 aaKnown RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 GLT1D1Q96MS3 346 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 CBX4O00257 560 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 TBX1O43435 398 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 TSPAN19P0C672 248 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 BDNFP23560 247 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 PTPN3P26045 913 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 MAGEA10P43363 369 aaPredicted RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 AIF1P55008 147 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 ACAP2Q15057 778 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 HASPINQ8TF76 798 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 SENP8Q96LD8 212 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 OR52E6Q96RD3 313 aa13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 PRG3Q9Y2Y8 225 aaPredicted RBP13.11□□□□□ -0.31
PCDHGB3-201ENST00000576222 PRR23AA6NEV1 266 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF99A8MXY4 864 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 CLPXO76031 633 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SERPIND1P05546 499 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 MTHFD1P11586 935 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 MYL12AP19105 171 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 OR1G1P47890 313 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 NRG1Q02297 640 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 DPYSL2Q16555 572 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 TYSND1Q2T9J0 566 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 KLHL12Q53G59 568 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 KIAA0408Q6ZU52 694 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 LRRC49Q8IUZ0 686 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 LRRC52Q8N7C0 313 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 KDM3BQ7LBC6 1761 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 CLDN5O00501 218 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 NTRK1P04629 796 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF182P17025 639 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 L1CAMP32004 1257 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 ASPAP45381 313 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 ALDH6A1Q02252 535 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 CXCL9Q07325 125 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 FGD3Q5JSP0 725 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 RAB43Q86YS6 212 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SYT12Q8IV01 421 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 TDRD1Q9BXT4 1180 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 FAM126AQ9BYI3 521 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 KAT8Q9H7Z6 458 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 INTS10Q9NVR2 710 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms