RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 TTC30BQ8N4P2 665 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 MCUQ8NE86 351 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 SKA1Q96BD8 255 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 AP2M1Q96CW1 435 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 EID2BQ96D98 161 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 SNF8Q96H20 258 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 PHOX2BQ99453 314 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 TRIM31Q9BZY9 425 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 RAB17Q9H0T7 212 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 MBNL1Q9NR56 388 aaKnown RBP13.96□□□□□ -0.17
RPAIN-217ENST00000575711 CD84Q9UIB8 345 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 CA5BQ9Y2D0 317 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 UTP11Q9Y3A2 253 aaKnown RBP13.96□□□□□ -0.17
RPAIN-217ENST00000575711 ARL5AQ9Y689 179 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 SLCO1B1Q9Y6L6 691 aa13.96□□□□□ -0.17
RPAIN-217ENST00000575711 CACNA1HO95180 2353 aa13.96□□□□□ -0.18
RPAIN-217ENST00000575711 A6NNZ2 444 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 STX7O15400 261 aaKnown RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 MAGEC1O60732 1142 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 PPFIA2O75334 1257 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 CFIP05156 583 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 IVDP26440 423 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 C21orf59P57076 290 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 SESN2P58004 480 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 DPTQ07507 201 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 OVGP1Q12889 678 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 MSLNQ13421 630 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 MTM1Q13496 603 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 LAMB3Q13751 1172 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 CCDC6Q16204 474 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 TRIM61Q5EBN2 209 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 ZDHHC20Q5W0Z9 365 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 ESRP1Q6NXG1 681 aaKnown RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 KYAT3Q6YP21 454 aaKnown RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 RFLNAQ6ZTI6 216 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 PTAR1Q7Z6K3 402 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 ABI3BPQ7Z7G0 1075 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 IQCHQ86VS3 1027 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 HOOK3Q86VS8 718 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 NLRP8Q86W28 1048 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 MMGT1Q8N4V1 131 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 MFSD2AQ8NA29 543 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 BBOF1Q8ND07 529 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 RUBCNQ92622 972 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 BMFQ96LC9 184 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 ERP44Q9BS26 406 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 CDH19Q9H159 772 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 ABCG8Q9H221 673 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 FAM83DQ9H4H8 585 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 XAB2Q9HCS7 855 aaKnown RBP13.95□□□□□ -0.18
RPAIN-217ENST00000575711 BPIFA1Q9NP55 256 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 BFARQ9NZS9 450 aa13.95□□□□□ -0.18
RPAIN-217ENST00000575711 MUC6Q6W4X9 2439 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 A0A1W2PR77 199 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 HEATR9A2RTY3 570 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 POM121BA6NF01 834 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 H0Y8X5 98 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 GOLGA8MH3BSY2 632 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 SMAPO00193 183 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 TOR1BO14657 336 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 KHNYNO15037 678 aaKnown RBP13.94□□□□□ -0.18
RPAIN-217ENST00000575711 VILLO15195 856 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
RPAIN-217ENST00000575711 LRP3O75074 770 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 PYGLP06737 847 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 MLNP12872 115 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 TSHRP16473 764 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 BPIP17213 487 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 GPR1P46091 355 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 RABIFP47224 123 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 NPY2RP49146 381 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 CSNK1EP49674 416 aaKnown RBP13.94□□□□□ -0.18
RPAIN-217ENST00000575711 DCDC1P59894 354 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 SPEM2Q0P670 501 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 INPP5AQ14642 412 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 MORF4L2Q15014 288 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 PLA2G2CQ5R387 149 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 RAET1GQ6H3X3 334 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 PNCKQ6P2M8 343 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 SLC23A3Q6PIS1 610 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 LAYNQ6UX15 382 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 ZNF534Q76KX8 674 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
RPAIN-217ENST00000575711 SCAMP4Q969E2 229 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 KLHDC7BQ96G42 594 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 SERPINB12Q96P63 405 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 RANBP9Q96S59 729 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 RIOK2Q9BVS4 552 aaKnown RBP13.94□□□□□ -0.18
RPAIN-217ENST00000575711 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
RPAIN-217ENST00000575711 IL22Q9GZX6 179 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 L2HGDHQ9H9P8 463 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 IL17CQ9P0M4 197 aa13.94□□□□□ -0.18
RPAIN-217ENST00000575711 NFKBIL1Q9UBC1 381 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms