RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 FRMD7Q6ZUT3 714 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 GAREM2Q75VX8 874 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 KCNV2Q8TDN2 545 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 EXT2Q93063 718 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 PTERQ96BW5 349 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 ZBP1Q9H171 429 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 BPIFA1Q9NP55 256 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 SLC7A8Q9UHI5 535 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 FAM50BQ9Y247 325 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 OR51B4Q9Y5P0 310 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 GBF1Q92538 1859 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 TRPC5OSA6NMA1 111 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 SRP72O76094 671 aaKnown RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 CTSAP10619 480 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 PRDX6P30041 224 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 FMO4P31512 558 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 GTF2A1P52655 376 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 EPHB1P54762 984 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 CUL3Q13618 768 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 PTPRRQ15256 657 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 RCN1Q15293 331 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 ATXN7L2Q5T6C5 722 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 NET1Q7Z628 596 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 TMEM199Q8N511 208 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 DCAF4L2Q8NA75 395 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 LENG8Q96PV6 779 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 LBHD1Q9BQE6 289 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 TM6SF2Q9BZW4 377 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 POLR3BQ9NW08 1133 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-208ENST00000574755 FKBPLQ9UIM3 349 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 SH3BP1Q9Y3L3 701 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 PCDHB9Q9Y5E1 797 aa14.03□□□□□ -0.16
VPS33B-208ENST00000574755 STX7O15400 261 aaKnown RBP14.02□□□□□ -0.16
VPS33B-208ENST00000574755 SMIM24O75264 130 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 SKAP2O75563 359 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-208ENST00000574755 KRT36O76013 467 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 SUPT7LO94864 414 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 MT-CO1P00395 513 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 GNAZP19086 355 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 IMPDH1P20839 514 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-208ENST00000574755 MC4RP32245 332 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 PPARGP37231 505 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-208ENST00000574755 CDKN1CP49918 316 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-208ENST00000574755 SULT2A1Q06520 285 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 RALGPS1Q5JS13 557 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 C1orf146Q5VVC0 180 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 TMEM198Q66K66 360 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 CUZD1Q86UP6 607 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 AFAP1L2Q8N4X5 818 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 STON2Q8WXE9 905 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 LPGAT1Q92604 370 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 CATSPER2Q96P56 530 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 TCF12Q99081 682 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 CCDC28BQ9BUN5 200 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 C2orf49Q9BVC5 232 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-208ENST00000574755 TAS2R13Q9NYV9 303 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 PLK2Q9NYY3 685 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 CFAP97Q9P2B7 532 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 ARHGAP26Q9UNA1 814 aa14.02□□□□□ -0.16
VPS33B-208ENST00000574755 A0A088AWK7 358 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 A0A0U1RQS6 177 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 ZBBXA8MT70 800 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 K7ERQ8 282 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 GFRA2O00451 464 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 PSMG1O95456 288 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 GJA8P48165 433 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 CCDC6Q16204 474 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 TRMT5Q32P41 509 aaKnown RBP14.02□□□□□ -0.17
VPS33B-208ENST00000574755 PSAPL1Q6NUJ1 521 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 BBS7Q8IWZ6 715 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 FAM217AQ8IXS0 508 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 GPR65Q8IYL9 337 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 APCDD1Q8J025 514 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 CFAP61Q8NHU2 1237 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 ALG14Q96F25 216 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 SYTL2Q9HCH5 934 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 LAMA3Q16787 3333 aa14.02□□□□□ -0.17
VPS33B-208ENST00000574755 A0A1W2PRU2 124 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 BAIAP3O94812 1187 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 CSPG5O95196 566 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 C8AP07357 584 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 GJA1P17302 382 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PIK3R1P27986 724 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 SESN3P58005 492 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 ZRANB3Q5FWF4 1079 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 ZNF678Q5SXM1 525 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 RETSATQ6NUM9 610 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 RIPOR1Q6ZS17 1223 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 TPGS1Q6ZTW0 290 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 OR6K2Q8NGY2 324 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 L3HYPDHQ96EM0 354 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PANX3Q96QZ0 392 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 GSTO2Q9H4Y5 243 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 HACD3Q9P035 362 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 STK39Q9UEW8 545 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 VPS9D1Q9Y2B5 631 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 H3BMM5 538 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms