RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 PBKQ96KB5 322 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 MRGPRX2Q96LB1 330 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 LYSMD1Q96S90 227 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 FICDQ9BVA6 458 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 GPR63Q9BZJ6 419 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 PKD2L2Q9NZM6 624 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 SHOC2Q9UQ13 582 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 OR1A2Q9Y585 309 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 PCDHGB2Q9Y5G2 931 aa17.26■□□□□ 0.35
CLDN7-207ENST00000574070 SPTY2D1-AS1A0A0U1RR47 76 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 H3BM21 787 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 FLRT2O43155 660 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 IFNB1P01574 187 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
CLDN7-207ENST00000574070 GPR1P46091 355 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 RXRGP48443 463 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 STC1P52823 247 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 GDF10P55107 478 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 FZD2Q14332 565 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 INAVAQ3KP66 663 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 TPRG1LQ5T0D9 272 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ESRP1Q6NXG1 681 aaKnown RBP17.25■□□□□ 0.35
CLDN7-207ENST00000574070 PNCKQ6P2M8 343 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ENPP7Q6UWV6 458 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 LYSMD3Q7Z3D4 306 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 TAB3Q8N5C8 712 aaPredicted RBP17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ATL2Q8NHH9 583 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 RHBDD1Q8TEB9 315 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 AP2M1Q96CW1 435 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 PPP1R2P1Q96PQ5 205 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ZFYVE1Q9HBF4 777 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ZNF711Q9Y462 761 aa17.25■□□□□ 0.35
CLDN7-207ENST00000574070 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLDN7-207ENST00000574070 ZZEF1O43149 2961 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 LOC285095A0A1B0GVY8 99 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 TM4SF5O14894 197 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 KCNK5O95279 499 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 TSHRP16473 764 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 HLA-DPA1P20036 260 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 CSRP1P21291 193 aaKnown RBP17.24■□□□□ 0.35
CLDN7-207ENST00000574070 STIP1P31948 543 aaKnown RBP17.24■□□□□ 0.35
CLDN7-207ENST00000574070 CHRNA4P43681 627 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 GNG11P61952 73 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 NFATC4Q14934 902 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 SHBQ15464 509 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 CCNG2Q16589 344 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 PARP6Q2NL67 630 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 SIRPB2Q5JXA9 342 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 FAXCQ5TGI0 409 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 PSAPL1Q6NUJ1 521 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 MACC1Q6ZN28 852 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 RFLNAQ6ZTI6 216 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 TECPR1Q7Z6L1 1165 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 CCDC89Q8N998 374 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 CAMK1GQ96NX5 476 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
CLDN7-207ENST00000574070 ABCG8Q9H221 673 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 WDR26Q9H7D7 661 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 MAGEE1Q9HCI5 957 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 GPR27Q9NS67 375 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 MOSPD1Q9UJG1 213 aa17.24■□□□□ 0.35
CLDN7-207ENST00000574070 K7ESM1 405 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 GCATO75600 419 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 AGTP01019 485 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 EPOP01588 193 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 ATXN1LP0C7T5 689 aaKnown RBP17.23■□□□□ 0.35
CLDN7-207ENST00000574070 JUNDP17535 347 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 KELP23276 732 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 GRK6P43250 576 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 HNRNPKP61978 463 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLDN7-207ENST00000574070 PPARDQ03181 441 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 OASLQ15646 514 aaKnown RBP17.23■□□□□ 0.35
CLDN7-207ENST00000574070 SLC1A5Q15758 541 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 P3H1Q32P28 736 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 RD3Q7Z3Z2 195 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 NRSN1Q8IZ57 195 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 CBARPQ8N350 705 aaPredicted RBP17.23■□□□□ 0.35
CLDN7-207ENST00000574070 BLOC1S5Q8TDH9 187 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 SAP25Q8TEE9 199 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 SCAMP4Q969E2 229 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 FUBP1Q96AE4 644 aaKnown RBP17.23■□□□□ 0.35
CLDN7-207ENST00000574070 WDR92Q96MX6 357 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 APOL2Q9BQE5 337 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 PHPT1Q9NRX4 125 aaPredicted RBP17.23■□□□□ 0.35
CLDN7-207ENST00000574070 KLQ9UEF7 1012 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 ZKSCAN5Q9Y2L8 839 aa17.23■□□□□ 0.35
CLDN7-207ENST00000574070 PDE2AO00408 941 aaPredicted RBP17.22■□□□□ 0.35
CLDN7-207ENST00000574070 PIAS2O75928 621 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 CSF2P04141 144 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 FGF1P05230 155 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 SPINT3P49223 89 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 LMAN1P49257 510 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 EIF2B5Q13144 721 aaKnown RBP17.22■□□□□ 0.35
CLDN7-207ENST00000574070 SPARCL1Q14515 664 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 SIX1Q15475 284 aaPredicted RBP17.22■□□□□ 0.35
CLDN7-207ENST00000574070 CDKN3Q16667 212 aa17.22■□□□□ 0.35
CLDN7-207ENST00000574070 ALS2CLQ60I27 953 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms