RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 FAM129CQ86XR2 697 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 ARHGAP12Q8IWW6 846 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 CACNA2D3Q8IZS8 1091 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 NAGSQ8N159 534 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 AGBL5Q8NDL9 886 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 OR4D9Q8NGE8 314 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 SNRNP25Q9BV90 132 aaKnown RBP16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 FRMD8Q9BZ67 464 aaPredicted RBP16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 SLC39A1Q9NY26 324 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 TMEM9Q9P0T7 183 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 SEPT3Q9UH03 358 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 SIK3Q9Y2K2 1263 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 PCDHGA3Q9Y5H0 932 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 ST14Q9Y5Y6 855 aa16.05■□□□□ 0.16
HCFC1R1-203ENST00000572355 SPTA1P02549 2419 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 EFCAB7A8K855 629 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 PPM1DO15297 605 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 CPP00450 1065 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 ERCC2P18074 760 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 PSMA2P25787 234 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 VIPR1P32241 457 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 ETV3P41162 512 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 ACTR1BP42025 376 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 POLD2P49005 469 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 ACTR1AP61163 376 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 CTBSQ01459 385 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 IL10RBQ08334 325 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 TRA2AQ13595 282 aaKnown RBP eCLIP16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 RFTN1Q14699 578 aaPredicted RBP16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 LBRQ14739 615 aaKnown RBP16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 NRSN1Q8IZ57 195 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 NEK11Q8NG66 645 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 DTD2Q96FN9 168 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 PEBP4Q96S96 227 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 KCTD15Q96SI1 283 aaPredicted RBP16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 AGPAT1Q99943 283 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 TEX101Q9BY14 249 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 TRNAU1APQ9NX07 287 aaKnown RBP16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 KCNK4Q9NYG8 393 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 ANKMY1Q9P2S6 941 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 PCDHGC4Q9Y5F7 938 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 PTPN13Q12923 2485 aa16.04■□□□□ 0.16
HCFC1R1-203ENST00000572355 COL12A1Q99715 3063 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 IGHV1OR21-1A0A087WYE8 117 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 ZNF891A8MT65 544 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 ATMINO43313 823 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 RAD1O60671 282 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 PRKAR1AP10644 381 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 THRAP10827 490 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 ATP1A3P13637 1013 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 GPR3P46089 330 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 CCR10P46092 362 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 RENBPP51606 427 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 MYL5Q02045 173 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 ZNF235Q14590 738 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 PPP6R3Q5H9R7 873 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 TMCO4Q5TGY1 634 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 ANKS6Q68DC2 871 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 HSD11B1LQ7Z5J1 315 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 ZNF761Q86XN6 746 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 TP53INP2Q8IXH6 220 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 MCOLN2Q8IZK6 566 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 DDA1Q9BW61 102 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 CDH19Q9H159 772 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 OCIAD1Q9NX40 245 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 PLEKHM1Q9Y4G2 1056 aa16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 TLN1Q9Y490 2541 aaKnown RBP16.03■□□□□ 0.16
HCFC1R1-203ENST00000572355 DOPEY2Q9Y3R5 2298 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 SOCS5O75159 536 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 CDK11BP21127 795 aaKnown RBP16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 LHCGRP22888 699 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 ADCY8P40145 1251 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 COPB1P53618 953 aaKnown RBP16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 SLC10A7Q0GE19 358 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 ERMARDQ5T6L9 678 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 Q6ZVL8 140 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 FNIP1Q8TF40 1166 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 AHCYL2Q96HN2 611 aaKnown RBP16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 PSKH2Q96QS6 385 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 OR2M4Q96R27 311 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 SLC17A4Q9Y2C5 497 aa16.02■□□□□ 0.16
HCFC1R1-203ENST00000572355 NPIPB15A6NHN6 443 aaPredicted RBP16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 EIF3CLB5ME19 914 aaKnown RBP16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 HTRA2O43464 458 aaPredicted RBP16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 DUX1O43812 170 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 IVLP07476 585 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 CYP2A6P11509 494 aaPredicted RBP16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 NFKBIAP25963 317 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 PEX6Q13608 980 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 UBAP2LQ14157 1087 aaKnown RBP16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 PTPRRQ15256 657 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 IGFBP7Q16270 282 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
HCFC1R1-203ENST00000572355 DCAF12Q5T6F0 453 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms