RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 GSCP56915 257 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-206ENST00000572083 RAB15P59190 212 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 CDK3Q00526 305 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 DEFB109BQ30KR1 87 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 SNAP47Q5SQN1 464 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 ATP1A1-AS1Q5TC04 95 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 DOK6Q6PKX4 331 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 NLGN4XQ8N0W4 816 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 BMPERQ8N8U9 685 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 MLKLQ8NB16 471 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 NLGN4YQ8NFZ3 816 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-206ENST00000572083 KIAA1143Q96AT1 154 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-206ENST00000572083 RTP4Q96DX8 246 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 MCEEQ96PE7 176 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 GOLGA6AQ9NYA3 693 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 TTC24A2A3L6 582 aaPredicted RBP19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ARHGAP42A6NI28 874 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 A8MU76 341 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ADCY8P40145 1251 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ETV3P41162 512 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ACTR1BP42025 376 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 KLK7P49862 253 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 SCNN1BP51168 640 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ZNF143P52747 638 aaPredicted RBP19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ACTR1AP61163 376 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 LACTB2Q53H82 288 aaPredicted RBP19.81■□□□□ 0.76
CCDC40-206ENST00000572083 TMEM71Q6P5X7 295 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 TRIM72Q6ZMU5 477 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 ARHGAP36Q6ZRI8 547 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 SP110Q9HB58 689 aa19.81■□□□□ 0.76
CCDC40-206ENST00000572083 PRR19A6NJB7 356 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 SIGLEC16A6NMB1 481 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 DFFAO00273 331 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 MTSS1O43312 755 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 CALB1P05937 261 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 AIF1P55008 147 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 RPL7AP62424 266 aaKnown RBP19.8■□□□□ 0.76
CCDC40-206ENST00000572083 GPLD1P80108 840 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 SQSTM1Q13501 440 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 HIST2H2BCQ6DN03 193 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 RAET1GQ6H3X3 334 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 DNAJC24Q6P3W2 148 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 TIPARPQ7Z3E1 657 aaKnown RBP19.8■□□□□ 0.76
CCDC40-206ENST00000572083 PDCD6IPQ8WUM4 868 aaKnown RBP19.8■□□□□ 0.76
CCDC40-206ENST00000572083 APOBEC4Q8WW27 367 aaKnown RBP19.8■□□□□ 0.76
CCDC40-206ENST00000572083 STARD8Q92502 1023 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 MIB2Q96AX9 1013 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 DTD2Q96FN9 168 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 AHCYL2Q96HN2 611 aaKnown RBP19.8■□□□□ 0.76
CCDC40-206ENST00000572083 TEFMQ96QE5 360 aaKnown RBP19.8■□□□□ 0.76
CCDC40-206ENST00000572083 DPYSL5Q9BPU6 564 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 VPS16Q9H269 839 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 NLRC4Q9NPP4 1024 aa19.8■□□□□ 0.76
CCDC40-206ENST00000572083 MYO9AB2RTY4 2548 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 TRBV23OR9-2A0A075B6M9 112 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 ANKRD62A6NC57 917 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 HEXIM1O94992 359 aaKnown RBP19.79■□□□□ 0.76
CCDC40-206ENST00000572083 NR1D1P20393 614 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 MAP4P27816 1152 aaKnown RBP19.79■□□□□ 0.76
CCDC40-206ENST00000572083 ERCC5P28715 1186 aaPredicted RBP19.79■□□□□ 0.76
CCDC40-206ENST00000572083 SOX5P35711 763 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 POLR2FP61218 127 aaKnown RBP19.79■□□□□ 0.76
CCDC40-206ENST00000572083 AP1S1P61966 158 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 CLEC16AQ2KHT3 1053 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 C16orf46Q6P387 395 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 HSD11B1LQ7Z5J1 315 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 ARHGAP12Q8IWW6 846 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 SPRY4Q9C004 299 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 LRRC4CQ9HCJ2 640 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 APMAPQ9HDC9 416 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 TP53TG5Q9Y2B4 290 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 SLC17A4Q9Y2C5 497 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 PCDHGC4Q9Y5F7 938 aa19.79■□□□□ 0.76
CCDC40-206ENST00000572083 NOTCH2Q04721 2471 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 EEF2KO00418 725 aaKnown RBP19.78■□□□□ 0.76
CCDC40-206ENST00000572083 EPHB6O15197 1021 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 CPP00450 1065 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 IVLP07476 585 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 LHCGRP22888 699 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 VIPR1P32241 457 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 JAM2P57087 298 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 NSUN2Q08J23 767 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC40-206ENST00000572083 PEX6Q13608 980 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 CA9Q16790 459 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 DPCR1Q3MIW9 517 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 MON1BQ7L1V2 547 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 KDELC2Q7Z4H8 507 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 PHF13Q86YI8 300 aaPredicted RBP19.78■□□□□ 0.76
CCDC40-206ENST00000572083 NPWQ8N729 165 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 SLC37A2Q8TED4 501 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 FNIP1Q8TF40 1166 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 SLC38A3Q99624 504 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 CNPY3Q9BT09 278 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 EFHD1Q9BUP0 239 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 FAM207AQ9NSI2 230 aaPredicted RBP19.78■□□□□ 0.76
CCDC40-206ENST00000572083 SAMSN1Q9NSI8 373 aaKnown RBP19.78■□□□□ 0.76
CCDC40-206ENST00000572083 SEPT11Q9NVA2 429 aaKnown RBP19.78■□□□□ 0.76
CCDC40-206ENST00000572083 TAB2Q9NYJ8 693 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 DONSONQ9NYP3 566 aa19.78■□□□□ 0.76
CCDC40-206ENST00000572083 AP4E1Q9UPM8 1137 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms