RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 YAP1P46937 504 aaKnown RBP17.46■□□□□ 0.38
SCARF1-205ENST00000571272 ATP4BP51164 291 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 PTPRCAPQ14761 206 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 SLC36A3Q495N2 470 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 RABL3Q5HYI8 236 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 TFAP2DQ7Z6R9 452 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 AQP12AQ8IXF9 295 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 L3HYPDHQ96EM0 354 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 NPLQ9BXD5 320 aaPredicted RBP17.46■□□□□ 0.38
SCARF1-205ENST00000571272 TRIM15Q9C019 465 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 RGS18Q9NS28 235 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 TMLHEQ9NVH6 421 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 ABCD2Q9UBJ2 740 aa17.46■□□□□ 0.38
SCARF1-205ENST00000571272 H3BMM5 538 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 F2P00734 622 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 HGFP14210 728 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 ECT2LQ008S8 904 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 IHHQ14623 411 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 MFSD10Q14728 455 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 FUT11Q495W5 492 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TIGD5Q53EQ6 642 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 DHRS4L2Q6PKH6 230 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 LYSMD3Q7Z3D4 306 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 ADGRG5Q8IZF4 528 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TMEM86AQ8N2M4 240 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TNIP2Q8NFZ5 429 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TRPC4APQ8TEL6 797 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 CASP10Q92851 521 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 VPS33AQ96AX1 596 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 LRRC58Q96CX6 371 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 PABPC5Q96DU9 382 aaKnown RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 CENPNQ96H22 339 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TINF2Q9BSI4 451 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 ZFC3H1O60293 1989 aaKnown RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 FNDC1Q4ZHG4 1894 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 A0A1B0GTL3 188 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 BBIP1A8MTZ0 92 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 CCR1P32246 355 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 CCT8P50990 548 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 MAPK10P53779 464 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 DIO3P55073 304 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 DSC2Q02487 901 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 PLCL1Q15111 1095 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 SLC14A2Q15849 920 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TIGD7Q6NT04 549 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 LZTR1Q8N653 840 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 PACRGLQ8N7B6 248 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 MAGEE2Q8TD90 523 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 HASPINQ8TF76 798 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 THAP11Q96EK4 314 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 C9orf16Q9BUW7 83 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 NAA50Q9GZZ1 169 aaKnown RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 ABHD16BQ9H3Z7 469 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 TUBB1Q9H4B7 451 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 PIF1Q9H611 641 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 POLR1BQ9H9Y6 1135 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 POLR3BQ9NW08 1133 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-205ENST00000571272 FADS3Q9Y5Q0 445 aa17.45■□□□□ 0.38
SCARF1-205ENST00000571272 A0A1W2PPW3 197 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 SH3PXD2BA1X283 911 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 J3KR12 359 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 AZIN1O14977 448 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 THP07101 528 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 CASP2P42575 452 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ANKRD23Q86SG2 305 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ZNF554Q86TJ5 538 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ZNF354CQ86Y25 554 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 TSPAN18Q96SJ8 248 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 PAIP1Q9H074 479 aaKnown RBP17.44■□□□□ 0.38
SCARF1-205ENST00000571272 HIPK3Q9H422 1215 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 CSNK1G1Q9HCP0 422 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 TUBA8Q9NY65 449 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-205ENST00000571272 HACD3Q9P035 362 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ACTR3BQ9P1U1 418 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ZNF711Q9Y462 761 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ACOX3O15254 700 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 FGF10O15520 208 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ZSCAN9O15535 394 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-205ENST00000571272 SLC10A7Q0GE19 358 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 ATP6AP1Q15904 470 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 TMEM26Q6ZUK4 368 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 MINDY1Q8N5J2 469 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 MYRFLQ96LU7 910 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 TBATAQ96M53 351 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 SLC25A51Q9H1U9 297 aa17.44■□□□□ 0.38
SCARF1-205ENST00000571272 NYNRINQ9P2P1 1898 aaKnown RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 E9PAM4 449 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 IGLV3-25P01717 112 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 HSD17B1P14061 328 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 VARSP26640 1264 aaKnown RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 PCSK1P29120 753 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 CYP2C18P33260 490 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 SCNN1GP51170 649 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 RAB39AQ14964 217 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 OR4D1Q15615 310 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 NEDD8Q15843 81 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms