RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ATP1A4Q13733 1029 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF169Q14929 603 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 C5orf22Q49AR2 442 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 ZC3H12AQ5D1E8 599 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 FBXL22Q6P050 247 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC30A9Q6PML9 568 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 IGFL2Q6UWQ7 119 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 ATP6V0D2Q8N8Y2 350 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 NECAB1Q8N987 351 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC4A11Q8NBS3 891 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 FBXO18Q8NFZ0 1043 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 ADAMTS18Q8TE60 1221 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 PARD3BQ8TEW8 1205 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 ELMO2Q96JJ3 720 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 FER1L6-AS2Q96M78 137 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 RPRD1AQ96P16 312 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 TRIM56Q9BRZ2 755 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SGPP1Q9BX95 441 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 OSBPL1AQ9BXW6 950 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 CARS2Q9HA77 564 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 AGPAT3Q9NRZ7 376 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 MOSPD1Q9UJG1 213 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 TCFL5Q9UL49 500 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 ST14Q9Y5Y6 855 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC30A1Q9Y6M5 507 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 PHF3Q92576 2039 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 USF3Q68DE3 2245 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PPP1R3GB7ZBB8 358 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PDE2AO00408 941 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 CRLF1O75462 422 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 UGT2B4P06133 528 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ESRRAP11474 423 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 CD58P19256 250 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ITIH2P19823 946 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 GKP32189 559 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 DNA2P51530 1060 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 IRAK1P51617 712 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SUOXP51687 545 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 CASP6P55212 293 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 CDH4P55283 916 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 CTBSQ01459 385 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ELP6Q0PNE2 266 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PDAP1Q13442 181 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 EIF4EBP2Q13542 120 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 TLR1Q15399 786 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 HIF1AQ16665 826 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ME3Q16798 604 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF394Q53GI3 561 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PWWP2BQ6NUJ5 590 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 RETSATQ6NUM9 610 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PODNL1Q6PEZ8 512 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 STXBP4Q6ZWJ1 553 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 TECPR1Q7Z6L1 1165 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 TAC4Q86UU9 113 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SFRP1Q8N474 314 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 CLEC1AQ8NC01 280 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PLA2G15Q8NCC3 412 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SIMC1Q8NDZ2 872 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 DNAJB14Q8TBM8 379 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC37A2Q8TED4 501 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ISG20Q96AZ6 181 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SH3KBP1Q96B97 665 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 KLHL32Q96NJ5 620 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 IP6K3Q96PC2 410 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 LGR4Q9BXB1 951 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 LIME1Q9H400 295 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 GPAMQ9HCL2 828 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SARS2Q9NP81 518 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF358Q9NW07 568 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 DNAJB12Q9NXW2 375 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC12A6Q9UHW9 1150 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 SH3BGRL2Q9UJC5 107 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 BTRCQ9Y297 605 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 PLEKHA6Q9Y2H5 1048 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF281Q9Y2X9 895 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 HS3ST4Q9Y661 456 aa6.57□□□□□ -1.36
HERPUD1-217ENST00000569429 A0A0D9SEW6 157 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 CXorf51AA0A1B0GTR3 108 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 TGFB1I1O43294 461 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 EPB41L2O43491 1005 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 ZMPSTE24O75844 475 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 GABBR2O75899 941 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 UNC5CO95185 931 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 IGLV3-25P01717 112 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 IGHEP01854 428 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 FUCA1P04066 466 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 RHOCP08134 193 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 LCP1P13796 627 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 CD19P15391 556 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 GJB2P29033 226 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 SEPHS1P49903 392 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 CYP2J2P51589 502 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 DGKQP52824 942 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 RAD23BP54727 409 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 HHEXQ03014 270 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 RBPJQ06330 500 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 LRRC73Q5JTD7 316 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 HMBOX1Q6NT76 420 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms