RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
SMG1-213ENST00000567737 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
SMG1-213ENST00000567737 CSMD2Q7Z408 3487 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 A0A1B0GTL3 188 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 CFAP69A5D8W1 941 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ZSCAN5CA6NGD5 496 aaPredicted RBP13.74□□□□□ -0.21
SMG1-213ENST00000567737 BUB1O43683 1085 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 NDUFA10O95299 355 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ACTR1BP42025 376 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 FASLGP48023 281 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 FMO5P49326 533 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ITGA1P56199 1179 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ACTR1AP61163 376 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 CTBSQ01459 385 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 CDK18Q07002 472 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 CETN1Q12798 172 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ZRSR2Q15696 482 aaKnown RBP13.74□□□□□ -0.21
SMG1-213ENST00000567737 UGT8Q16880 541 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 PNCKQ6P2M8 343 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 SLC26A9Q7LBE3 791 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ZNF354CQ86Y25 554 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 MAGEH1Q9H213 219 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 ACTL8Q9H568 366 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 PHPT1Q9NRX4 125 aaPredicted RBP13.74□□□□□ -0.21
SMG1-213ENST00000567737 TMEM51Q9NW97 253 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 SIDT1Q9NXL6 827 aaKnown RBP13.74□□□□□ -0.21
SMG1-213ENST00000567737 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMG1-213ENST00000567737 PPARGC1AQ9UBK2 798 aaKnown RBP13.74□□□□□ -0.21
SMG1-213ENST00000567737 LNPEPQ9UIQ6 1025 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 PADI1Q9ULC6 663 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 SUFUQ9UMX1 484 aa13.74□□□□□ -0.21
SMG1-213ENST00000567737 AKAP9Q99996 3911 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 PRRC2CQ9Y520 2896 aaKnown RBP13.73□□□□□ -0.21
SMG1-213ENST00000567737 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 C21orf140B9A014 251 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 MT-ND3P03897 115 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 CEACAM5P06731 702 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
SMG1-213ENST00000567737 ITGA3P26006 1051 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 GNA15P30679 374 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 MAPK9P45984 424 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 MAPKAPK2P49137 400 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 SNX16P57768 344 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 SLC6A3Q01959 620 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 GRM3Q14832 879 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 ARTNQ5T4W7 220 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 BRAT1Q6PJG6 821 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 XYLT1Q86Y38 959 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 RBMXL3Q8N7X1 1067 aaKnown RBP13.73□□□□□ -0.21
SMG1-213ENST00000567737 CT55Q8WUE5 264 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 CASKIN2Q8WXE0 1202 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
SMG1-213ENST00000567737 INTS4Q96HW7 963 aaKnown RBP13.73□□□□□ -0.21
SMG1-213ENST00000567737 RANBP9Q96S59 729 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
SMG1-213ENST00000567737 SUV39H2Q9H5I1 410 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 USP25Q9UHP3 1055 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 CNTN6Q9UQ52 1028 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 PCNX1Q96RV3 2341 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 CROCCQ5TZA2 2017 aa13.73□□□□□ -0.21
SMG1-213ENST00000567737 TRBV23OR9-2A0A075B6M9 112 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 INSIG1O15503 277 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 KDELR3O43731 214 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 BUB1BO60566 1050 aaPredicted RBP13.72□□□□□ -0.21
SMG1-213ENST00000567737 RAMP2O60895 175 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 ADCY8P40145 1251 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 NDST2P52849 883 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 RWDD4Q6NW29 188 aaKnown RBP13.72□□□□□ -0.21
SMG1-213ENST00000567737 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
SMG1-213ENST00000567737 NETO2Q8NC67 525 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 ZNF397Q8NF99 534 aaPredicted RBP13.72□□□□□ -0.21
SMG1-213ENST00000567737 SLC37A2Q8TED4 501 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 OR6C1Q96RD1 312 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 TBCBQ99426 244 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 TSG101Q99816 390 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 PRR14Q9BWN1 585 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 STN1Q9H668 368 aaKnown RBP13.72□□□□□ -0.21
SMG1-213ENST00000567737 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 LHX9Q9NQ69 397 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 NDFIP2Q9NV92 336 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 ST14Q9Y5Y6 855 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 MED13LQ71F56 2210 aa13.72□□□□□ -0.21
SMG1-213ENST00000567737 RASA4BC9J798 803 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 PMM2O15305 246 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 LRRTM2O43300 516 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 RASA4O43374 803 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 CEACAM4O75871 244 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 FUCA1P04066 466 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 ERBB2P04626 1255 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 ANKRD34CP0C6C1 535 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 PTGER4P35408 488 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 FKBP3Q00688 224 aaKnown RBP13.71□□□□□ -0.21
SMG1-213ENST00000567737 HHEXQ03014 270 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 RALGDSQ12967 914 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 IL11RAQ14626 422 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 ACOX1Q15067 660 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms