RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, human

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPCAT2-208	ENST00000566915	SYTL1	Q8IYJ3	562 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	RBFA	Q8N0V3	343 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZNF655	Q8N720	491 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ENDOV	Q8N8Q3	282 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	C12orf42	Q96LP6	360 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	KREMEN1	Q96MU8	473 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	MLPH	Q9BV36	600 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	C1QTNF7	Q9BXJ2	289 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	DGCR6L	Q9BY27	220 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CADM1	Q9BY67	442 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CDT1	Q9H211	546 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ARL15	Q9NXU5	204 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	IGSF9	Q9P2J2	1179 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ENTPD4	Q9Y227	616 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZNF510	Q9Y2H8	683 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915		A0A0J9YYE9	177 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915		H0YJX3	145 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CBX4	O00257	560 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SUV39H1	O43463	412 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	NBN	O60934	754 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	MAP3K6	O95382	1288 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	PCNA	P12004	261 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC7A1	P30825	629 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZNF33A	Q06730	810 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC1A5	Q15758	541 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	PARP15	Q460N3	678 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CCDC157	Q569K6	752 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	LIN54	Q6MZP7	749 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	C6orf89	Q6UWU4	347 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC30A10	Q6XR72	485 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	PIGZ	Q86VD9	579 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZZZ3	Q8IYH5	903 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	RNF148	Q8N7C7	305 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	BPIFB6	Q8NFQ5	453 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CSGALNACT1	Q8TDX6	532 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	C10orf82	Q8WW14	230 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SENP8	Q96LD8	212 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	RDH12	Q96NR8	316 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	PCDHB18P	Q96TA0	734 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	GML	Q99445	158 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	GLOD4	Q9HC38	313 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ERVK-5	Q9HDB9	667 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	NUDT4	Q9NZJ9	180 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	NOCT	Q9UK39	431 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SPATA2	Q9UM82	520 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	WDR37	Q9Y2I8	494 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	GMEB1	Q9Y692	573 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ZNF831	Q5JPB2	1677 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CNTNAP2	Q9UHC6	1331 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915		A0A0U1RQJ8	604 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	FAM47E-STBD1	D6RA91	191 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	UBXN8	O00124	270 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC9A3R1	O14745	358 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ADAMDEC1	O15204	470 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC22A1	O15245	554 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	NADK	O95544	446 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	NPPA	P01160	153 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	C4BPA	P04003	597 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	S100A9	P06702	114 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CTSH	P09668	335 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	THRB	P10828	461 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CLK2	P49760	499 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	EEFSEC	P57772	596 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SNRPD1	P62314	119 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	LGALS3BP	Q08380	585 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	IL18R1	Q13478	541 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	IRF5	Q13568	498 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	TEAD4	Q15561	434 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	GPR107	Q5VW38	600 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ALYREF	Q86V81	257 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CERS5	Q8N5B7	392 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	GOLM1	Q8NBJ4	401 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	TSPEAR	Q8WU66	669 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	PHF10	Q8WUB8	498 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	KCTD4	Q8WVF5	259 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	P2RY11	Q96G91	374 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	FAM84A	Q96KN4	292 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC7A5P2	Q9GIP4	190 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ROGDI	Q9GZN7	287 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	EPB41L1	Q9H4G0	881 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SLC17A7	Q9P2U7	560 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CHKB	Q9Y259	395 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	MAN2B2	Q9Y2E5	1009 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	GIT1	Q9Y2X7	761 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	STON1	Q9Y6Q2	735 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	SCN7A	Q01118	1682 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	ITGB4	P16144	1822 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	CILP	O75339	1184 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	REM1	O75628	298 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	STAU1	O95793	577 aa	Known RBP	4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	VTN	P04004	478 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	FYN	P06241	537 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	C8B	P07358	591 aa		4.35	□□□□□ -1.71
LPCAT2-208	ENST00000566915	UROS	P10746	265 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms