RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TMEM125Q96AQ2 219 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 TNIP3Q96KP6 325 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 GLT1D1Q96MS3 346 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 TUT1Q9H6E5 874 aaKnown RBP15.69■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF408Q9H9D4 720 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 FANCEQ9HB96 536 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 TLR9Q9NR96 1032 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 GMIPQ9P107 970 aa15.69■□□□□ 0.1
COMMD4-215ENST00000566843 KIAA1522Q9P206 1035 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-215ENST00000566843 AURKAO14965 403 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 ANGPT2O15123 496 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 ANXA9O76027 345 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 SNAP29O95721 258 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 MT-CO1P00395 513 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 FGF4P08620 206 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 YAP1P46937 504 aaKnown RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 YBX1P67809 324 aaKnown RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 CYP51A1Q16850 503 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 KIF19Q2TAC6 998 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 FAM219BQ5XKK7 198 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 NEPROQ6NW34 567 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 PAQR9Q6ZVX9 377 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 RNF135Q8IUD6 432 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 SFRP1Q8N474 314 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 B3GALNT2Q8NCR0 500 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 PHF21BQ96EK2 531 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 TSPAN17Q96FV3 270 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 FICDQ9BVA6 458 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 ANAPC2Q9UJX6 822 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 COL1A2P08123 1366 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 KPNA4O00629 521 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 MLLT10P55197 1068 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 NFKB2Q00653 900 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 GNA12Q03113 381 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 CAPRIN1Q14444 709 aaKnown RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 BCL2A1Q16548 175 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 CCDC92Q53HC0 331 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 BROXQ5VW32 411 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 XAF1Q6GPH4 301 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 CHST15Q7LFX5 561 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 FAM35AQ86V20 835 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 OSTM1Q86WC4 334 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 FBXO16Q8IX29 292 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 MAGEE2Q8TD90 523 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 TSPEARQ8WU66 669 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 CSF3RQ99062 836 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 MROQ9BYG7 248 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 TRIM54Q9BYV2 358 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 ELP3Q9H9T3 547 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 GLOD4Q9HC38 313 aa15.68■□□□□ 0.1
COMMD4-215ENST00000566843 UBQLN1Q9UMX0 589 aaKnown RBP15.68■□□□□ 0.1
COMMD4-215ENST00000566843 PDCD11Q14690 1871 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 LDLRP01130 860 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 TXNP10599 105 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 IREB2P48200 963 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 LEPRP48357 1165 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 GSK3BP49841 420 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 ITGADQ13349 1161 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 OXA1LQ15070 435 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 CYP2A13Q16696 494 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 ARL13BQ3SXY8 428 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 APPL2Q8NEU8 664 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 IPMKQ8NFU5 416 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 USP33Q8TEY7 942 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 PRKD2Q9BZL6 878 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 R3HDMLQ9H3Y0 253 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 SOX17Q9H6I2 414 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 NMRK2Q9NPI5 230 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 SDR39U1Q9NRG7 319 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 GIN1Q9NXP7 522 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 FAM32AQ9Y421 112 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 TRIM17Q9Y577 477 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 CSADQ9Y600 493 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 ZFC3H1O60293 1989 aaKnown RBP15.67■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF236Q9UL36 1845 aa15.67■□□□□ 0.1
COMMD4-215ENST00000566843 CCDC162PA2VCL2 907 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 CLDN5O00501 218 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 INPP4BO15327 924 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 ABCB7O75027 752 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 E2F6O75461 281 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 CCNCP24863 283 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 HOXA11P31270 313 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-215ENST00000566843 SLC26A3P40879 764 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 GEMP55040 296 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 PLCL1Q15111 1095 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF789Q5FWF6 425 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 PM20D1Q6GTS8 502 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 BLOC1S3Q6QNY0 202 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 CLEC20AQ6ZU45 233 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 SPNS2Q8IVW8 549 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 OSCP1Q8WVF1 389 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 ANKRD49Q8WVL7 239 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 NRBF2Q96F24 287 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 MAGED4Q96JG8 741 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
COMMD4-215ENST00000566843 ZNF641Q96N77 438 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms