RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PRR11Q96HE9 360 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 NAF1Q96HR8 494 aaKnown RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 ZNF578Q96N58 590 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 TDRD1Q9BXT4 1180 aaKnown RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 FRMD8Q9BZ67 464 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 SUDS3Q9H7L9 328 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 CARS2Q9HA77 564 aaKnown RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 PHPT1Q9NRX4 125 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 RBM22Q9NW64 420 aaKnown RBP eCLIP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
CMTM3-209ENST00000565003 GOLGA6AQ9NYA3 693 aa10.02□□□□□ -0.81
CMTM3-209ENST00000565003 CD84Q9UIB8 345 aa10.02□□□□□ -0.81
CMTM3-209ENST00000565003 LCMT1Q9UIC8 334 aa10.02□□□□□ -0.81
CMTM3-209ENST00000565003 MOSPD1Q9UJG1 213 aa10.02□□□□□ -0.81
CMTM3-209ENST00000565003 CHKBQ9Y259 395 aa10.02□□□□□ -0.81
CMTM3-209ENST00000565003 LOC400499M0QZD8 3231 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 A0A0J9YYE9 177 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 A0A1W2PQM1 296 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CAPN8A6NHC0 703 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 C3orf70A6NLC5 250 aaPredicted RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 D6RAR5 112 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 PDE2AO00408 941 aaPredicted RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 TRBC1P01850 177 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 RPLP0P05388 317 aaKnown RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CEACAM5P06731 702 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 MX2P20592 715 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 TEAD1P28347 426 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 GNPDA1P46926 289 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 PCBP4P57723 403 aaKnown RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ERVPABLB-1P60509 514 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CCL7P80098 99 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 DPTQ07507 201 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ZBTB17Q13105 803 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 HLTFQ14527 1009 aaKnown RBP eCLIP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CERCAMQ5T4B2 595 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ZFYVE27Q5T4F4 411 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 IGF2-ASQ6U949 168 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 NRROSQ86YC3 692 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CCDC13Q8IYE1 715 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CCNYQ8ND76 341 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ZNF248Q8NDW4 579 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 SCAMP4Q969E2 229 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 GRAMD1AQ96CP6 724 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 CCDC42Q96M95 316 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 SLC46A1Q96NT5 459 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 RNF157Q96PX1 679 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 GFM1Q96RP9 751 aaKnown RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 LGMNQ99538 433 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 FOXP3Q9BZS1 431 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ABCG8Q9H221 673 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 DPEP2Q9H4A9 486 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 PRORYQ9H606 182 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 KCTD5Q9NXV2 234 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 AMACRQ9UHK6 382 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 SUFUQ9UMX1 484 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 PCDHGA8Q9Y5G5 932 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ST14Q9Y5Y6 855 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 RNF215Q9Y6U7 377 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ARHGEF17Q96PE2 2063 aaPredicted RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 IGSF10Q6WRI0 2623 aa10.01□□□□□ -0.81
CMTM3-209ENST00000565003 SMG1Q96Q15 3661 aaKnown RBP10.01□□□□□ -0.81
CMTM3-209ENST00000565003 ATRXP46100 2492 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 CCDC187A0A096LP49 1063 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 CDRT15L2A8MXV6 281 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 ZNF487B1APH4 448 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 KCNK1O00180 336 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 MTA2O94776 668 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 MMP2P08253 660 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 TPM1P09493 284 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 GLB1P16278 677 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 ZNF30P17039 623 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 AK4P27144 223 aaPredicted RBP10□□□□□ -0.81
CMTM3-209ENST00000565003 GPR1P46091 355 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 POLD2P49005 469 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 STC1P52823 247 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 EPHB1P54762 984 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 PTSQ03393 145 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 PPIDQ08752 370 aaKnown RBP10□□□□□ -0.81
CMTM3-209ENST00000565003 TSR1Q2NL82 804 aaKnown RBP10□□□□□ -0.81
CMTM3-209ENST00000565003 C14orf28Q4W4Y0 310 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 SLC9A4Q6AI14 798 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 FOXR1Q6PIV2 292 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 DOK6Q6PKX4 331 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 NPNTQ6UXI9 565 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 ADAMTSL4Q6UY14 1074 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 SPRED1Q7Z699 444 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 TRIM74Q86UV6 250 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 CCNJLQ8IV13 435 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 RHOT2Q8IXI1 618 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 CNTD1Q8N815 330 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 Q8N9G6 341 aaPredicted RBP10□□□□□ -0.81
CMTM3-209ENST00000565003 LPCAT1Q8NF37 534 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 OR6C4Q8NGE1 309 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 AP2M1Q96CW1 435 aa10□□□□□ -0.81
CMTM3-209ENST00000565003 LIN37Q96GY3 246 aaPredicted RBP10□□□□□ -0.81
CMTM3-209ENST00000565003 FCRL3Q96P31 734 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms