RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 KCTD15Q96SI1 283 aaPredicted RBP12.36□□□□□ -0.43
SCAMP2-204ENST00000563829 TBCBQ99426 244 aa12.36□□□□□ -0.43
SCAMP2-204ENST00000563829 OR2B2Q9GZK3 357 aa12.36□□□□□ -0.43
SCAMP2-204ENST00000563829 CHST12Q9NRB3 414 aa12.36□□□□□ -0.43
SCAMP2-204ENST00000563829 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 TTC34A8MYJ7 566 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 SLC22A1O15245 554 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 NOBOXO60393 691 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 NPHS1O60500 1241 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ALX3O95076 343 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ICAM1P05362 532 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ALDOCP09972 364 aaKnown RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 KCNA5P22460 613 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 PRKACBP22694 351 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 NMBRP28336 390 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 PTGER2P43116 358 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 STYK1Q6J9G0 422 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ZCCHC8Q6NZY4 707 aaKnown RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 NEK5Q6P3R8 708 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 HACD2Q6Y1H2 254 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 SLC22A15Q8IZD6 547 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 BTN2A3PQ96KV6 586 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 DEPDC7Q96QD5 511 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 GPR22Q99680 433 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 HOPXQ9BPY8 73 aaPredicted RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 KCTD14Q9BQ13 255 aaPredicted RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 RHOBTB2Q9BYZ6 727 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ALG2Q9H553 416 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 UBP1Q9NZI7 540 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ZNF221Q9UK13 617 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 TSPAN16Q9UKR8 245 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 PTGDR2Q9Y5Y4 395 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 XPNPEP2O43895 674 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 KPNA6O60684 536 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 LRIG2O94898 1065 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 PGK1P00558 417 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 PSAPP07602 524 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 HSD17B1P14061 328 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 EIF2DP41214 584 aaKnown RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 GSK3BP49841 420 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 GNG2P59768 71 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 TNFAIP2Q03169 654 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 CHRNEQ04844 493 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 SMU1Q2TAY7 513 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 CTU2Q2VPK5 515 aaKnown RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 FAM20CQ8IXL6 584 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 CCDC185Q8N715 623 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 CELF2-AS1Q8N7Q2 184 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 CHDHQ8NE62 594 aaPredicted RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 C3orf30Q96M34 536 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 TMEM246Q9BRR3 403 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ASPSCR1Q9BZE9 553 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 SMURF2Q9HAU4 748 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 EIF2B3Q9NR50 452 aaKnown RBP12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 NDUFAF1Q9Y375 327 aa12.35□□□□□ -0.43
SCAMP2-204ENST00000563829 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 TEX28O15482 410 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 AHSGP02765 367 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 PPP1R8Q12972 351 aaKnown RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 CSHL1Q14406 222 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 DENND6AQ8IWF6 608 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 SYTL1Q8IYJ3 562 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 SPERTQ8NA61 448 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 GOLM1Q8NBJ4 401 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 HCAR2Q8TDS4 363 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 HDAC2Q92769 488 aaKnown RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 TMBIM1Q969X1 311 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 LRRC58Q96CX6 371 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 ZNF560Q96MR9 790 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 TMEM74Q96NL1 305 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 COQ7Q99807 217 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 LRRC4Q9HBW1 653 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 ABCD2Q9UBJ2 740 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 EVLQ9UI08 416 aaPredicted RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 SYNJ2BP-COX16A0A087WUM0 186 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 PDZK1P1A8MUH7 402 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 FXYD1O00168 92 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 GABARAPO95166 117 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 ASNSP08243 561 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 PSMB9P28065 219 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 MAP2K4P45985 399 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 ALDH3A2P51648 485 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 EMX1Q04741 257 aaPredicted RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 BST2Q10589 180 aaKnown RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 CBX2Q14781 532 aaPredicted RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 UGT3A2Q3SY77 523 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 ANKRD34AQ69YU3 496 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 CCBE1Q6UXH8 406 aaPredicted RBP12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 PLD3Q8IV08 490 aa12.34□□□□□ -0.43
SCAMP2-204ENST00000563829 ELMOD2Q8IZ81 293 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms