RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 TRPC7Q9HCX4 862 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 WSB2Q9NYS7 404 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 GGA1Q9UJY5 639 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 TMEM59LQ9UK28 342 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 PCDHA1Q9Y5I3 950 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 MSH6P52701 1360 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 INO80Q9ULG1 1556 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 TCAF2A6NFQ2 919 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 GABRR3A8MPY1 467 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 H0Y8G0 127 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 AKAP8O43823 692 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 SAP30O75446 220 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 TAF5LO75529 589 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 LCA5LO95447 670 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 CH25HO95992 272 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 LCATP04180 440 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 YES1P07947 543 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 DRD5P21918 477 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 PER3P56645 1201 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 JAM2P57087 298 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 GSDMDP57764 484 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 STX1BP61266 288 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 SP2Q02086 613 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 SOX4Q06945 474 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 SPP2Q13103 211 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 MADCAM1Q13477 382 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 GPR176Q14439 515 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 GALNTL6Q49A17 601 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 NKAIN1Q4KMZ8 207 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 MSS51Q4VC12 460 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 FAM98BQ52LJ0 330 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 BEX5Q5H9J7 111 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 LDLRAP1Q5SW96 308 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 CST9LP1Q5W188 147 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 SPECC1LQ69YQ0 1117 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 KIAA0930Q6ICG6 404 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 NHLRC1Q6VVB1 395 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 KIAA0408Q6ZU52 694 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 ADAMTSL2Q86TH1 951 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 AACSQ86V21 672 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMG1-207ENST00000563235 ZNF680Q8NEM1 530 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 ZNF397Q8NF99 534 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 OR8J2Q8NGG1 315 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 GPBAR1Q8TDU6 330 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 SEPT8Q92599 483 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 NMD3Q96D46 503 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 RCC1LQ96I51 464 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 ZFRQ96KR1 1074 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 FBXL18Q96ME1 805 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 PNMA5Q96PV4 448 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 CGREF1Q99674 301 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 DPH2Q9BQC3 489 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 MAGEB5Q9BZ81 275 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 CPEB1Q9BZB8 566 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 BHLHE41Q9C0J9 482 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 RNF208Q9H0X6 261 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 RIMS4Q9H426 269 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 C12orf10Q9HB07 376 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 NEK6Q9HC98 313 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 PRMT8Q9NR22 394 aaPredicted RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 TLR8Q9NR97 1041 aaKnown RBP4.79□□□□□ -1.64
SMG1-207ENST00000563235 EURLQ9NYK6 297 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 LRIT1Q9P2V4 623 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 HCN2Q9UL51 889 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 ANKRD36BQ8N2N9 1353 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 PTCH1Q13635 1447 aa4.79□□□□□ -1.64
SMG1-207ENST00000563235 LAMC1P11047 1609 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CCDC187A0A096LP49 1063 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 GOLGA8KD6RF30 607 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 AGPSO00116 658 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CYR61O00622 381 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SLC16A6O15403 523 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FAM86B2P0C5J1 330 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 MYZAPP0CAP1 466 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 HOXB8P17481 243 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 PTPRAP18433 802 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 HOXA13P31271 388 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 CTNNB1P35222 781 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PXNP49023 591 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 SLC7A2P52569 658 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SLC5A3P53794 718 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 LRRC14Q15048 493 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FAM98CQ17RN3 349 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 TMEM119Q4V9L6 283 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 TMEM31Q5JXX7 168 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 TMEM201Q5SNT2 666 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SLFN13Q68D06 897 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CDPF1Q6NVV7 123 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CCDC121Q6ZUS5 278 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FAM86B1Q8N7N1 296 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CAMKVQ8NCB2 501 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 AGBL3Q8NEM8 1001 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 OSCP1Q8WVF1 389 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SMG7Q92540 1137 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 MTFMTQ96DP5 389 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 DAZAP1Q96EP5 407 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 SAT2Q96F10 170 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms