RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 USP7Q93009 1102 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 NAP1L5Q96NT1 182 aaPredicted RBP16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CMKLR1Q99788 373 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ISCUQ9H1K1 167 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MRPL47Q9HD33 250 aaKnown RBP16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TAAR2Q9P1P5 351 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PHTF1Q9UMS5 762 aa16.68■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 COL6A6A6NMZ7 2263 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 A0A0U1RQS6 177 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 A0A1W2PQC6 194 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PYCARD-AS1I3L0S3 204 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PGLSO95336 258 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ECEL1O95672 775 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CPNE6O95741 557 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MYBL1P10243 752 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 POLD2P49005 469 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MAPK10P53779 464 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ILF3Q12906 894 aaKnown RBP eCLIP16.67■□□□□ 0.267e-14■■□□□ 12.1
VPS9D1-AS1-201ENST00000562298 NR1D2Q14995 579 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 AMZ1Q400G9 498 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 BOLA3Q53S33 107 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ZNF574Q6ZN55 896 aaPredicted RBP16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RFLNAQ6ZTI6 216 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ATPAF2Q8N5M1 289 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PATE1Q8WXA2 126 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SGF29Q96ES7 293 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TRIM11Q96F44 468 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SCRN2Q96FV2 425 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MCCC1Q96RQ3 725 aaPredicted RBP16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 NUDT22Q9BRQ3 303 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GSDMCQ9BYG8 508 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PCDH18Q9HCL0 1135 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TRNAU1APQ9NX07 287 aaKnown RBP16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 KCTD5Q9NXV2 234 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SLC17A4Q9Y2C5 497 aa16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 FLNBO75369 2602 aaKnown RBP16.67■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 UNC13CQ8NB66 2214 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GOLGA6CA6NDK9 693 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GOLGA6BA6NDN3 693 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PSMD11O00231 422 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MBD3O95983 291 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SOD1P00441 154 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PDHA1P08559 390 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GOLGA6DP0CG33 693 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CYP2A6P11509 494 aaPredicted RBP16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CTPS1P17812 591 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 WT1P19544 449 aaPredicted RBP16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TEAD1P28347 426 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ALDH4A1P30038 563 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MMP13P45452 471 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CDH6P55285 790 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CTBSQ01459 385 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SLC25A11Q02978 314 aaKnown RBP16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 MARC1Q5VT66 337 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RAET1GQ6H3X3 334 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SLC30A9Q6PML9 568 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 USP53Q70EK8 1073 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TECPR1Q7Z6L1 1165 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 VASH2Q86V25 355 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PIM3Q86V86 326 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 DTX1Q86Y01 620 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 NAGSQ8N159 534 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RCBTB1Q8NDN9 531 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PIH1D2Q8WWB5 315 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 BTBD6Q96KE9 485 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SMIM14Q96QK8 99 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GOLGA6AQ9NYA3 693 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PPIL1Q9Y3C6 166 aa16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ARHGEF17Q96PE2 2063 aaPredicted RBP16.66■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RHPN2P1A8MT19 583 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 GOLGA6L22H0YM25 854 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 FZD6O60353 706 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CCL4P13236 92 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CD1CP29017 333 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ADCY8P40145 1251 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 DPTQ07507 201 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 RALGPS1Q5JS13 557 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 ARMC12Q5T9G4 340 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 HGSNATQ68CP4 663 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 BBS5Q8N3I7 341 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TEX26Q8N6G2 289 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 NIPA2Q8N8Q9 360 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 TEKT4Q8WW24 435 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 EXTL1Q92935 676 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 THAP2Q9H0W7 228 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 CD84Q9UIB8 345 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PLEKHM1Q9Y4G2 1056 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 PCDHGA4Q9Y5G9 962 aa16.65■□□□□ 0.26
VPS9D1-AS1-201ENST00000562298 IGHV5-10-1A0A0J9YXX1 117 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PPM1DO15297 605 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ITGB2P05107 769 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IVLP07476 585 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CD48P09326 243 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IL4RP24394 825 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms