RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CACNG1Q06432 222 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 SEMA3AQ14563 771 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PTPRNQ16849 979 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 ZNF789Q5FWF6 425 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 RBM20Q5T481 1227 aaKnown RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 CERS6Q6ZMG9 384 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 C12orf40Q86WS4 652 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PLD6Q8N2A8 252 aaKnown RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 CYB5D2Q8WUJ1 264 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 SREK1Q8WXA9 508 aaKnown RBP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDDC3-206ENST00000561036 ZFYVE19Q96K21 471 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 SMIM14Q96QK8 99 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 MYADMQ96S97 322 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 TSSK1BQ9BXA7 367 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 FKBPLQ9UIM3 349 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 APPL1Q9UKG1 709 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 PLA2G4CQ9UP65 541 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
HDDC3-206ENST00000561036 C1orf232A0A0U1RR37 186 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 TTC34A8MYJ7 566 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 H2AFYO75367 372 aaKnown RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 ECI2O75521 394 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 WISP3O95389 354 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 TGDSO95455 350 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 LAMP2P13473 410 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CPA3P15088 417 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 PSMC3P17980 439 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CD9P21926 228 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 FDXRP22570 491 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 GRK2P25098 689 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 PPARGP37231 505 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 SUOXP51687 545 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 IRF9Q00978 393 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 PEX6Q13608 980 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 RUNX3Q13761 415 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CHI3L2Q15782 390 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 LYPLAL1Q5VWZ2 237 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 ZDHHC20Q5W0Z9 365 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 FOXR1Q6PIV2 292 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 FAM47EQ6ZV65 393 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 TBC1D1Q86TI0 1168 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 LDB1Q86U70 411 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 ZSWIM9Q86XI8 627 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 STK40Q8N2I9 435 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CHST14Q8NCH0 376 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 LPGAT1Q92604 370 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 AARSD1Q9BTE6 412 aaKnown RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 PRO3102Q9H379 93 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 DKK3Q9UBP4 350 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CDH22Q9UJ99 828 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 RUVBL2Q9Y230 463 aaKnown RBP17.09■□□□□ 0.33
HDDC3-206ENST00000561036 SLC30A1Q9Y6M5 507 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
HDDC3-206ENST00000561036 ATXN2Q99700 1313 aaKnown RBP17.08■□□□□ 0.32
HDDC3-206ENST00000561036 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 BNIP3LO60238 219 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 SLC4A1P02730 911 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 UGT2B4P06133 528 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 TROVE2P10155 538 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDDC3-206ENST00000561036 POU3F3P20264 500 aaPredicted RBP17.08■□□□□ 0.32
HDDC3-206ENST00000561036 ALDH3A1P30838 453 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 PTGER3P43115 390 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 SLC6A11P48066 632 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 ADARP55265 1226 aaKnown RBP17.08■□□□□ 0.32
HDDC3-206ENST00000561036 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 PCLAFQ15004 111 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 FAM83EQ2M2I3 478 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 ZRANB3Q5FWF4 1079 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 AGAP9Q5VTM2 703 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 C6orf89Q6UWU4 347 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 MTSS1LQ765P7 747 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 OTOAQ7RTW8 1153 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 GRIN3AQ8TCU5 1115 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF398Q8TD17 642 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 SORCS1Q8WY21 1168 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 EID2BQ96D98 161 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 C7orf26Q96N11 449 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 NECTIN4Q96NY8 510 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 NDNQ99608 321 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 TTC1Q99614 292 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 OLFM1Q99784 485 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 MECRQ9BV79 373 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 BRD9Q9H8M2 597 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 SLCO1B3Q9NPD5 702 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 IL36AQ9UHA7 158 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 ARL2BPQ9Y2Y0 163 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 WASF2Q9Y6W5 498 aa17.08■□□□□ 0.32
HDDC3-206ENST00000561036 OTOL1A6NHN0 477 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-206ENST00000561036 SNNO75324 88 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-206ENST00000561036 TBX10O75333 385 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 CLDN7O95471 211 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 SERPINE1P05121 402 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 CYP2A6P11509 494 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-206ENST00000561036 BST1Q10588 318 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms