RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 RASGEF1CQ8N431 466 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 P2RY11Q96G91 374 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 KLHL32Q96NJ5 620 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 TM6SF2Q9BZW4 377 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 SEMA3GQ9NS98 782 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 HMGXB4Q9UGU5 601 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PCDHGB3Q9Y5G1 929 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 DDX3YO15523 660 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 TSPAN8P19075 237 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 HTR1BP28222 390 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ASMTP46597 345 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CASP7P55210 303 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 RAB2AP61019 212 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 MYBPC1Q00872 1141 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 TNFAIP8L3Q5GJ75 292 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 FNBP1LQ5T0N5 605 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CPTPQ5TA50 214 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 OLFML2AQ68BL7 652 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 APOBEC3HQ6NTF7 200 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLC34A3Q8N130 599 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CNTD1Q8N815 330 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 C1GALT1C1Q96EU7 318 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PCDHB1Q9Y5F3 818 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 A0A1W2PPM1 405 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PRMT5O14744 637 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PSMA1P25786 263 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ADCYAP1R1P41586 468 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 TAS2R40P59535 323 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 USP4Q13107 963 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 IKBKEQ14164 716 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 LACTB2Q53H82 288 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 OR2T34Q8NGX1 318 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 OR2T3Q8NH03 318 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PCDH18Q9HCL0 1135 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 RGS10O43665 173 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLC28A2O43868 658 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PQBP1O60828 265 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PSIP1O75475 530 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 THRBP10828 461 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ACADLP28330 430 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CDH13P55290 713 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 GRM3Q14832 879 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 AKIRIN2Q53H80 203 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PIK3R6Q5UE93 754 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 GLYATQ6IB77 296 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 DEF8Q6ZN54 512 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 TOP6BLQ8N6T0 577 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CHCHD6Q9BRQ6 235 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLC35C2Q9NQQ7 365 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ARL8BQ9NVJ2 186 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CAMSAP1Q5T5Y3 1602 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 WNT10BO00744 389 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 PTPRAP18433 802 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 MTTPP55157 894 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 ELP6Q0PNE2 266 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 FAM131AQ6UXB0 335 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 ALG3Q92685 438 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 DDX4Q9NQI0 724 aaKnown RBP13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 IPO13O94829 963 aaKnown RBP13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 BMP6P22004 513 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 KIR3DL1P43629 444 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 CXCR3P49682 368 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLC25A52Q3SY17 297 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 DUSP16Q9BY84 665 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZFYVE1Q9HBF4 777 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 SOHLH2Q9NX45 425 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 USP32Q8NFA0 1604 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 UGT2B17O75795 530 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 IL18R1Q13478 541 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 CAPSQ13938 189 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 TYSND1Q2T9J0 566 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 RNASEH2BQ5TBB1 312 aaKnown RBP13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 CNSTQ6PJW8 725 aa13.19□□□□□ -0.3
CSPG4P11-201ENST00000560634 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms