RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 ZDHHC4Q9NPG8 344 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 RFXANKO14593 260 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 TSHRP16473 764 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 C11orf88Q6PI97 169 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 ANKS1BQ7Z6G8 1248 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 AADATQ8N5Z0 425 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 NELL1Q92832 810 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 FAM124BQ9H5Z6 455 aaPredicted RBP13.46□□□□□ -0.25
TRAF3-208ENST00000560371 SPAM1P38567 509 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 BUD31P41223 144 aaPredicted RBP13.46□□□□□ -0.25
TRAF3-208ENST00000560371 GPM6BQ13491 265 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 CERCAMQ5T4B2 595 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 CERS6Q6ZMG9 384 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 SAR1AQ9NR31 198 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 ANAPC2Q9UJX6 822 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 CPQQ9Y646 472 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 SERPINB7O75635 380 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 SMIM11AP58511 58 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.26
TRAF3-208ENST00000560371 PCDH20Q8N6Y1 951 aaKnown RBP13.46□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF607Q96SK3 696 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 LMAN2LQ9H0V9 348 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 NEK6Q9HC98 313 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 ASCC3Q8N3C0 2202 aaKnown RBP13.46□□□□□ -0.26
TRAF3-208ENST00000560371 TRIM24O15164 1050 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 NRSN1Q8IZ57 195 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 SNX27Q96L92 541 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 RHOJQ9H4E5 214 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 SNX15Q9NRS6 342 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 BTRCQ9Y297 605 aa13.46□□□□□ -0.26
TRAF3-208ENST00000560371 ZFP37Q9Y6Q3 630 aaPredicted RBP13.46□□□□□ -0.26
TRAF3-208ENST00000560371 ATP6AP2A0A1C7CYW4 349 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 AP3D1O14617 1153 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ATP6AP2O75787 350 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 IGFALSP35858 605 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 CDH4P55283 916 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 PDZK1Q5T2W1 519 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 XYLT1Q86Y38 959 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 C2orf73Q8N5S3 287 aaPredicted RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 DQX1Q8TE96 717 aaKnown RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 MRTO4Q9UKD2 239 aaKnown RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 WNT7AO00755 349 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 SQLEQ14534 574 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 DHRSXQ8N5I4 330 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 METTL21AQ8WXB1 218 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 OR52E6Q96RD3 313 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 TRBV23OR9-2A0A075B6M9 112 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ARCQ7LC44 396 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 C2orf15Q8WU43 125 aaKnown RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 MAGEH1Q9H213 219 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 SGK2Q9HBY8 427 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF304Q9HCX3 659 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 RAB21Q9UL25 225 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 KCNU1A8MYU2 1149 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 RPP40O75818 363 aaKnown RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 GNSP15586 552 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ILF3Q12906 894 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 CCL14Q16627 93 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 C3orf14Q9HBI5 128 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 XPR1Q9UBH6 696 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ARVCFO00192 962 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 TSPAN19P0C672 248 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ITGA2P17301 1181 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 CAP1Q01518 475 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 SEMA5AQ13591 1074 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 EML3Q32P44 896 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 LINC00032P0C843 101 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 C4BPBP20851 252 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 LRRC74BQ6ZQY2 392 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 IZUMO1Q8IYV9 350 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 RDH11Q8TC12 318 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 AENQ8WTP8 325 aaKnown RBP13.45□□□□□ -0.26
TRAF3-208ENST00000560371 PLD4Q96BZ4 506 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 HIC2Q96JB3 615 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 SLC38A3Q99624 504 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 COG5Q9UP83 839 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 EFR3BQ9Y2G0 817 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
TRAF3-208ENST00000560371 ENO4A6NNW6 628 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 BANF1O75531 89 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 CCNYL3P0C7X3 344 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 HNRNPLP14866 589 aaKnown RBP eCLIP13.44□□□□□ -0.263e-7■■■■□ 23.3
TRAF3-208ENST00000560371 SP2Q02086 613 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 GAD2Q05329 585 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 SLC20A2Q08357 652 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 ATP13A5Q4VNC0 1218 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 DDHD1Q8NEL9 900 aa13.44□□□□□ -0.26
TRAF3-208ENST00000560371 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
TRAF3-208ENST00000560371 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms