RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 MYO1AQ9UBC5 1043 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 DNAJB4Q9UDY4 337 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 CNOT7Q9UIV1 285 aaKnown RBP4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 CDH9Q9ULB4 789 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 USP18Q9UMW8 372 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 PCDHA7Q9UN72 937 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 MTMR6Q9Y217 621 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 PCDHA3Q9Y5H8 950 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 SNX14Q9Y5W7 946 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 NR2E3Q9Y5X4 410 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 PIAS3Q9Y6X2 628 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 NPATQ14207 1427 aa4.53□□□□□ -1.68
HMGB3P26-201ENST00000560051 NACADO15069 1562 aa4.53□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCNB3Q8WWL7 1395 aa4.53□□□□□ -1.69
HMGB3P26-201ENST00000560051 NISCHQ9Y2I1 1504 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ACEP12821 1306 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 A0A088AWK7 358 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 OR6C70A6NIJ9 312 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 A8MV72 311 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 WASH4PA8MWX3 477 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 DNALI1O14645 258 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC30A4O14863 429 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 BET1O15155 118 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RRP8O43159 456 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PHGDHO43175 533 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 VEGFDO43915 354 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SURF6O75683 361 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 UFL1O94874 794 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SEMA3DO95025 777 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 AK1P00568 194 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRLP01236 227 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 TUBBP07437 444 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 YES1P07947 543 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SNRPB2P08579 225 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ANXA5P08758 320 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ITGB6P18564 788 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 FGFR2P21802 821 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 HNRNPA2B1P22626 353 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ITGB8P26012 769 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC8A1P32418 973 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 GUCY1A2P33402 732 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RORAP35398 523 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SOAT1P35610 550 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 TAGLN2P37802 199 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ECI1P42126 302 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PAFAH1B1P43034 410 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 KCNC1P48547 511 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC9A3P48764 834 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCT4P50991 539 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARHGDIAP52565 204 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SELENOVP59797 346 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RAB1AP62820 205 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 TUBB4BP68371 445 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RPP30P78346 268 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PMP22Q01453 160 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CDK18Q07002 472 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 TMEM62Q0P6H9 643 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 MYO1EQ12965 1108 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RFTN1Q14699 578 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC39A14Q15043 492 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PON2Q15165 354 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PTPRRQ15256 657 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 STILQ15468 1287 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PPP1R3AQ16821 1122 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 WHAMMP3Q1A5X7 153 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 GAB4Q2WGN9 574 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CRY2Q49AN0 593 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZC2HC1CQ53FD0 456 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CST9LP1Q5W188 147 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CYP4F22Q6NT55 531 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRMT9Q6P2P2 845 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 FOXR2Q6PJQ5 311 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 COLCA1Q6ZS62 124 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 GPRIN3Q6ZVF9 776 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 FRA10AC1Q70Z53 315 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM122BQ7Z309 247 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 KCNK18Q7Z418 384 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CAMKMTQ7Z624 323 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RTN4RL1Q86UN2 441 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SCML4Q8N228 414 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARHGEF39Q8N4T4 335 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 BANPQ8N9N5 519 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZNF610Q8N9Z0 462 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 NSUN7Q8NE18 718 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SPATA4Q8NEY3 305 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ADCY4Q8NFM4 1077 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 IL31RAQ8NI17 732 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 NFKBIDQ8NI38 313 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 UBA3Q8TBC4 463 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 TAS1R2Q8TE23 839 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PYDC1Q8WXC3 89 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RFT1Q96AA3 541 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZDHHC12Q96GR4 267 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SIGLEC10Q96LC7 697 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZSWIM3Q96MP5 696 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 FOXN4Q96NZ1 517 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 KLHL5Q96PQ7 755 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms