RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CAMKMTQ7Z624 323 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SPRED1Q7Z699 444 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SDCCAG8Q86SQ7 713 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC190Q86UF4 302 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CNGA4Q8IV77 575 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ZDHHC23Q8IYP9 409 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HACE1Q8IYU2 909 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CEP57L1Q8IYX8 460 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 DSELQ8IZU8 1212 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SLC4A11Q8NBS3 891 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SCCPDHQ8NBX0 429 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CEP76Q8TAP6 659 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 GDAP1Q8TB36 358 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PIGOQ8TEQ8 1089 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CLMNQ96JQ2 1002 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ZFYVE19Q96K21 471 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC114Q96M63 670 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FER1L6-AS2Q96M78 137 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FIZ1Q96SL8 496 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 SH2D3AQ9BRG2 576 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 GPATCH1Q9BRR8 931 aaKnown RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PIMREGQ9BSJ6 248 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TUBB6Q9BUF5 446 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FAM129AQ9BZQ8 928 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 RTN4RQ9BZR6 473 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 B3GNT4Q9C0J1 378 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PIGMQ9H3S5 423 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 GOLPH3LQ9H4A5 285 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 MVB12BQ9H7P6 319 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CHMP1AQ9HD42 196 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 MLXIPLQ9NP71 852 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 CYSLTR2Q9NS75 346 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 RNF146Q9NTX7 359 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM45AQ9NWC5 275 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 PAG1Q9NWQ8 432 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TAS2R14Q9NYV8 317 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 COQ3Q9NZJ6 369 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 KLHL13Q9P2N7 655 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 COPG2Q9UBF2 871 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 HACL1Q9UJ83 578 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 TUBE1Q9UJT0 475 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF112Q9UJU3 913 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FBXW11Q9UKB1 542 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ADAM21Q9UKJ8 722 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 EXO1Q9UQ84 846 aaKnown RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF148Q9UQR1 794 aa2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FNDC1Q4ZHG4 1894 aaPredicted RBP2.34□□□□□ -2.03
GABPB1-209ENST00000559100 FLT1P17948 1338 aa2.34□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF335Q9H4Z2 1342 aaPredicted RBP2.34□□□□□ -2.04
GABPB1-209ENST00000559100 LOC102723996A0A087X1L8 192 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GPR75-ASB3A0A0A6YYF3 556 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 EDDM13A0A1B0GTR0 161 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TCRBV21S2A2A0A5A6 115 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 LNP1A1A4G5 178 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CPED1A4D0V7 1026 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GRID2IPA4D2P6 1211 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 STMND1H3BQB6 276 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PAPSS1O43252 624 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 RSL1D1O76021 490 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SLCO2B1O94956 709 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 BAG2O95816 211 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TOP3BO95985 862 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 NHLRC4P0CG21 123 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 INSRRP14616 1297 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 IFNAR1P17181 557 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ATP5F1P24539 256 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PTAFRP25105 342 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 HSPA4P34932 840 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 AVPR1AP37288 418 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PRKCIP41743 596 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 NPY4RP50391 375 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 RAB28P51157 221 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CCR3P51677 355 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GPR143P51810 404 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CAPZA1P52907 286 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 HMGA2P52926 109 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PPP2R2BQ00005 443 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GHRHRQ02643 423 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 UBXN1Q04323 297 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF91Q05481 1191 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 NEDD9Q14511 834 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 LPIN1Q14693 890 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SHBQ15464 509 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 KRT24Q2M2I5 525 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MMEL1Q495T6 779 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CRY2Q49AN0 593 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MIDNQ504T8 468 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SGO1Q5FBB7 561 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 EARS2Q5JPH6 523 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 COLEC12Q5KU26 742 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 C6orf10Q5SRN2 563 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF362Q5T0B9 420 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ARMC4Q5T2S8 1044 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 KIAA1614Q5VZ46 1190 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 KRT79Q5XKE5 535 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GGNBP1Q5YKI7 109 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PMS2CLQ68D20 193 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM211Q6ICI0 200 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SLC2A7Q6PXP3 512 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PPP1R21Q6ZMI0 780 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms