RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 HARSP12081 509 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 SCG2P13521 617 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SLC5A1P13866 664 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 HGFP14210 728 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PORP16435 677 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 BTF3P20290 206 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 CALML3P27482 149 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 EPHB2P29323 1055 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 GKP32189 559 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 FOXN2P32314 431 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 GTF2H1P32780 548 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 RPL21P46778 160 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 CPT1AP50416 773 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 TIRAPP58753 221 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 DR1Q01658 176 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CDR2Q01850 454 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CDK18Q07002 472 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CDC16Q13042 620 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CBX3Q13185 183 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 APOFQ13790 326 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 KRT72Q14CN4 511 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 RCN1Q15293 331 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ASIC2Q16515 512 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 HLFQ16534 295 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PDK4Q16654 411 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 EDRF1Q3B7T1 1238 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ZC2HC1CQ53FD0 456 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 C1orf141Q5JVX7 400 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SYCP2LQ5T4T6 812 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 UBAP2Q5T6F2 1119 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 C11orf63Q6NUN7 778 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 DUS1LQ6P1R4 473 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 CCDC174Q6PII3 467 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 DSTYKQ6XUX3 929 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 TRIM72Q6ZMU5 477 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 MFSD6Q6ZSS7 791 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 NCCRP1Q6ZVX7 275 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 CCDC80Q76M96 950 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ZNF571Q7Z3V5 609 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 PEX26Q7Z412 305 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SPATA24Q86W54 205 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 LONP2Q86WA8 852 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ZBED8Q8IZ13 594 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ST13P4Q8IZP2 240 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 ANKRD13CQ8N6S4 541 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ENAHQ8N8S7 591 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 PRELID2Q8N945 189 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SPATA5Q8NB90 893 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 KCNH5Q8NCM2 988 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PPFIBP2Q8ND30 876 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ABHD11Q8NFV4 315 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 FNDC8Q8TC99 324 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 RFFLQ8WZ73 363 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ESR2Q92731 530 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ARHGEF2Q92974 986 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 TTC17Q96AE7 1141 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SKA1Q96BD8 255 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CTHRC1Q96CG8 243 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 RITA1Q96K30 269 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ZBTB45Q96K62 511 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 SNX22Q96L94 193 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 C8orf48Q96LL4 319 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PRICKLE1Q96MT3 831 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 TGS1Q96RS0 853 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 ECSITQ9BQ95 431 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ISCA1Q9BUE6 129 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 TUBB6Q9BUF5 446 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 DDX23Q9BUQ8 820 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 VN1R3Q9BXE9 311 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SPZ1Q9BXG8 430 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CADM1Q9BY67 442 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 NAPBQ9H115 298 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CDC42EP4Q9H3Q1 356 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 SYNCQ9H7C4 482 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 RMI1Q9H9A7 625 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PPCSQ9HAB8 311 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 USP29Q9HBJ7 922 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ERVK-5Q9HDB9 667 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PIH1D3Q9NQM4 214 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 TCP11L1Q9NUJ3 509 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 BLOC1S4Q9NUP1 217 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ASIC5Q9NY37 505 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 TUBA8Q9NY65 449 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 FLRT1Q9NZU1 646 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SENP1Q9P0U3 644 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SPATA7Q9P0W8 599 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 FETUBQ9UGM5 382 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ARMCX3Q9UH62 379 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 VPS51Q9UID3 782 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 CCNL1Q9UK58 526 aaPredicted RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 ANGPTL2Q9UKU9 493 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 RIMKLBQ9ULI2 386 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 PAIP2BQ9ULR5 123 aaKnown RBP3.32□□□□□ -1.88
HERC1-203ENST00000558532 CORO2BQ9UQ03 480 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.32□□□□□ -1.88
HERC1-203ENST00000558532 FAM205AQ6ZU69 1335 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ZNF532Q9HCE3 1301 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 ZMYM2Q9UBW7 1377 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 MEGF6O75095 1541 aa3.32□□□□□ -1.88
HERC1-203ENST00000558532 SLX4Q8IY92 1834 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms