RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 VPS4AQ9UN37 437 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 VPS9D1Q9Y2B5 631 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 CBY1Q9Y3M2 126 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 SNX5Q9Y5X3 404 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 USP3Q9Y6I4 520 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 CSNK1G3Q9Y6M4 447 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 PAPPA2Q9BXP8 1791 aa5.52□□□□□ -1.53
GABPB1-207ENST00000558335 C15orf38-AP3S2A0A0A6YYH1 394 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 HEATR9A2RTY3 570 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SH3D21A4FU49 640 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 LRRC72A6NJI9 287 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ZNF839A8K0R7 811 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 M0QYT0 321 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 NFKBIEO00221 500 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PSMD9O00233 223 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 BTN3A1O00481 513 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TXNDC9O14530 226 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SLC9A3R1O14745 358 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 DCLK1O15075 740 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ST8SIA5O15466 376 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 DCXO43602 365 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 BUD23O43709 281 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ACSL4O60488 711 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 DNAJA2O60884 412 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GRAP2O75791 330 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SERPINI2O75830 405 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 BCAS2O75934 225 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PAPSS2O95340 614 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 NPPAP01160 153 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 C2P06681 752 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 C8BP07358 591 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GSTM1P09488 218 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 DARSP14868 501 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 RAG1P15918 1043 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GOT1P17174 413 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ITGA2P17301 1181 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PSMC3P17980 439 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PTPN1P18031 435 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 CYP2B6P20813 491 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PIK3R1P27986 724 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PSMB4P28070 264 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GSTM2P28161 218 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 RXRGP48443 463 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 NUDT2P50583 147 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 CRYBB1P53674 252 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 BPIFB3P59826 476 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 RAB10P61026 200 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 RAB14P61106 215 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 CYP4F8P98187 520 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 FOLH1Q04609 750 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ZNF33BQ06732 778 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 BNIP2Q12982 314 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GRIK2Q13002 908 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TRIM32Q13049 653 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 BAMBIQ13145 260 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 UBAP2LQ14157 1087 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ADGRE1Q14246 886 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 INPP5AQ14642 412 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 USP10Q14694 798 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GEN1Q17RS7 908 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SOWAHAQ2M3V2 549 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PLEKHG6Q3KR16 790 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 USP41Q3LFD5 358 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 DUSP28Q4G0W2 176 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 COQ5Q5HYK3 327 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 VWA5B1Q5TIE3 1220 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 KIAA1614Q5VZ46 1190 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 KIAA0930Q6ICG6 404 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 OR7E24Q6IFN5 339 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PKN3Q6P5Z2 889 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TRMT10BQ6PF06 316 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 RBM44Q6ZP01 1051 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ARPINQ7Z6K5 226 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TTC7BQ86TV6 843 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 COLGALT2Q8IYK4 626 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 FAM9CQ8IZT9 166 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TAB3Q8N5C8 712 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 CAMKK1Q8N5S9 505 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 LEMD2Q8NC56 503 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 GSTCDQ8NEC7 633 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 FANK1Q8TC84 345 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 PNPT1Q8TCS8 783 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 HM13Q8TCT9 377 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 STYXQ8WUJ0 223 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 CHAC2Q8WUX2 184 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 HPS1Q92902 700 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 KHSRPQ92945 711 aaKnown RBP eCLIP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ASB9Q96DX5 294 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SMARCD1Q96GM5 515 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TEKT5Q96M29 485 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ZNF578Q96N58 590 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 FCRL5Q96RD9 977 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SNX18Q96RF0 628 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 RANBP9Q96S59 729 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 SORT1Q99523 831 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 TM9SF2Q99805 663 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 MRPL45Q9BRJ2 306 aaKnown RBP5.51□□□□□ -1.53
GABPB1-207ENST00000558335 ACAT2Q9BWD1 397 aa5.51□□□□□ -1.53
GABPB1-207ENST00000558335 UNC93B1Q9H1C4 597 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms