RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 WDR46O15213 610 aaKnown RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ZC3H11AO75152 810 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 JRKO75564 520 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 RGS11O94810 467 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ZWINTO95229 277 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 TRUB2O95900 331 aaKnown RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 LCKP06239 509 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 MMP2P08253 660 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CYP2A6P11509 494 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 BMP5P22003 454 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DNASE1P24855 282 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 HOXC8P31273 242 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 KRT2P35908 639 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SLC16A2P36021 539 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 PRKCIP41743 596 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 GPR143P51810 404 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SIM1P81133 766 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 MRPS34P82930 218 aaKnown RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 PLP2Q04941 152 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 AP1B1Q10567 949 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SNAPC1Q16533 368 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 KRT24Q2M2I5 525 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 C2orf68Q2NKX9 166 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 PLEKHO1Q53GL0 409 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ODF2Q5BJF6 829 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 RARS2Q5T160 578 aaKnown RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 FNDC7Q5VTL7 733 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DAB2IPQ5VWQ8 1189 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 TMEM211Q6ICI0 200 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 C11orf88Q6PI97 169 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 PPP1R21Q6ZMI0 780 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 RAPH1Q70E73 1250 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ERN2Q76MJ5 926 aaKnown RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 GRASPQ7Z6J2 395 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CHSY1Q86X52 802 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 TMC8Q8IU68 726 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 EPHX4Q8IUS5 362 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DENND6AQ8IWF6 608 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DDIASQ8IXT1 998 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 HACE1Q8IYU2 909 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 NDUFAF2Q8N183 169 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 HORMAD2Q8N7B1 307 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CAMKVQ8NCB2 501 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 MCPH1Q8NEM0 835 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 BEST2Q8NFU1 509 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 MOSPD2Q8NHP6 518 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 WIPF2Q8TF74 440 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 GRK7Q8WTQ7 553 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DVL3Q92997 716 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 HDAC11Q96DB2 347 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SLC41A2Q96JW4 573 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CCDC114Q96M63 670 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 HARBI1Q96MB7 349 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF830Q96NB3 372 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SLITRK1Q96PX8 696 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 AGAP2Q99490 1192 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 FAM110AQ9BQ89 295 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SYT17Q9BSW7 474 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 EFHD1Q9BUP0 239 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SLC25A23Q9BV35 468 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 NUP85Q9BW27 656 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DNAI2Q9GZS0 605 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CDT1Q9H211 546 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 PIGMQ9H3S5 423 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DENND2DQ9H6A0 471 aaPredicted RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 AAMDCQ9H7C9 122 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 DNAJC18Q9H819 358 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 TRPV4Q9HBA0 871 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CPNE5Q9HCH3 593 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 MTMR10Q9NXD2 777 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 SERGEFQ9UGK8 458 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ACAD8Q9UKU7 415 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ISY1Q9ULR0 285 aaKnown RBP3.19□□□□□ -1.9
TRAV28-201ENST00000557548 ERVK-11Q9UQG0 969 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 LAMP3Q9UQV4 416 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 CLIC4Q9Y696 253 aa3.19□□□□□ -1.9
TRAV28-201ENST00000557548 EDDM13A0A1B0GTR0 161 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 A4D1N5 150 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 GRID2IPA4D2P6 1211 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 OR6C76A6NM76 312 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 MAGEB17A8MXT2 336 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 AKR1B15C9JRZ8 316 aaPredicted RBP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 HSPB6O14558 160 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 PRPF4O43172 522 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 SYNCRIPO60506 623 aaKnown RBP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 UGDHO60701 494 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 FMO6PO60774 539 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 RSL1D1O76021 490 aaKnown RBP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 CLDN7O95471 211 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 TOP3BO95985 862 aaKnown RBP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 HIST1H2ABP04908 130 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 NHLRC4P0CG21 123 aaPredicted RBP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 PRLRP16471 622 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 HIST1H2ADP20671 130 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 PRCPP42785 496 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 AMPHP49418 695 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 CLK1P49759 484 aaKnown RBP3.18□□□□□ -1.9
TRAV28-201ENST00000557548 RAB28P51157 221 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 SLC12A2P55011 1212 aa3.18□□□□□ -1.9
TRAV28-201ENST00000557548 CDH13P55290 713 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms