RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 KLHL2O95198 593 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CPA3P15088 417 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 PPARGP37231 505 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 IRF9Q00978 393 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CACNG1Q06432 222 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 RUNX3Q13761 415 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CHI3L2Q15782 390 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 PTPRNQ16849 979 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 GAB4Q2WGN9 574 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 ZRANB3Q5FWF4 1079 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 ZNF789Q5FWF6 425 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 RBM20Q5T481 1227 aaKnown RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 FOXR1Q6PIV2 292 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CERS6Q6ZMG9 384 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 TPRG1Q6ZUI0 275 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 LDB1Q86U70 411 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CEP97Q8IW35 865 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 PLD6Q8N2A8 252 aaKnown RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 STK40Q8N2I9 435 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CBARPQ8N350 705 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CHST14Q8NCH0 376 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 HCAR2Q8TDS4 363 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 SORCS1Q8WY21 1168 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 VOPP1Q96AW1 172 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 ELSPBP1Q96BH3 223 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 SCRN2Q96FV2 425 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-233ENST00000557529 MYADMQ96S97 322 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 NDNQ99608 321 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 TTC1Q99614 292 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 C1QTNF1Q9BXJ1 281 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 POPDC3Q9HBV1 291 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 COPG2Q9UBF2 871 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 CDH22Q9UJ99 828 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 APPL1Q9UKG1 709 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 SLC30A1Q9Y6M5 507 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 ANKRD36A6QL64 1941 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 TSPAN11A1L157 253 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 TROVE2P10155 538 aaKnown RBP eCLIP12.45□□□□□ -0.42
SHMT2-233ENST00000557529 LAMP2P13473 410 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 PSMC3P17980 439 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 FDXRP22570 491 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 EIF2DP41214 584 aaKnown RBP12.45□□□□□ -0.42
SHMT2-233ENST00000557529 SLC6A11P48066 632 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 PRKAA2P54646 552 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 IRX4P78413 519 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 XIAPP98170 497 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 SEMA3AQ14563 771 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 CDKN3Q16667 212 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 FAM83EQ2M2I3 478 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 CTC1Q2NKJ3 1217 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 AGAP9Q5VTM2 703 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 ZDHHC20Q5W0Z9 365 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 KLC3Q6P597 504 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 OTOAQ7RTW8 1153 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 ZSWIM9Q86XI8 627 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 TNS4Q8IZW8 715 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 CENPLQ8N0S6 344 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-233ENST00000557529 UCMAQ8WVF2 138 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 KCTD4Q8WVF5 259 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 LPGAT1Q92604 370 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 SCYL1Q96KG9 808 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 KLHL32Q96NJ5 620 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 OLFM1Q99784 485 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 AARSD1Q9BTE6 412 aaKnown RBP12.45□□□□□ -0.42
SHMT2-233ENST00000557529 MECRQ9BV79 373 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 CCDC68Q9H2F9 335 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 GPAMQ9HCL2 828 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 BPIFA1Q9NP55 256 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 SLCO1B3Q9NPD5 702 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 DKK3Q9UBP4 350 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 IL36AQ9UHA7 158 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 RUVBL2Q9Y230 463 aaKnown RBP12.45□□□□□ -0.42
SHMT2-233ENST00000557529 CRYL1Q9Y2S2 319 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 ARL2BPQ9Y2Y0 163 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
SHMT2-233ENST00000557529 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-233ENST00000557529 TBX10O75333 385 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 H2AFYO75367 372 aaKnown RBP12.44□□□□□ -0.42
SHMT2-233ENST00000557529 ECI2O75521 394 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 TGDSO95455 350 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 CLDN7O95471 211 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 SERPINE1P05121 402 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 LTA4HP09960 611 aaKnown RBP12.44□□□□□ -0.42
SHMT2-233ENST00000557529 MYL2P10916 166 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-233ENST00000557529 ITGALP20701 1170 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 GRK2P25098 689 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 ALDH3A1P30838 453 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 SUOXP51687 545 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 BST1Q10588 318 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 STX3Q13277 289 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 PEX6Q13608 980 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 PCLAFQ15004 111 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 PTPRRQ15256 657 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 LYPLAL1Q5VWZ2 237 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 CRTC1Q6UUV9 634 aa12.44□□□□□ -0.42
SHMT2-233ENST00000557529 NUDT18Q6ZVK8 323 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms