RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DIO3P55073 304 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 ATP6V0D1P61421 351 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 IHHQ14623 411 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 INPP5AQ14642 412 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 RPS6KA2Q15349 733 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 NEDD8Q15843 81 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 C14orf80Q86SX3 495 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 PATL1Q86TB9 770 aaKnown RBP11.39□□□□□ -0.59
SRP54-213ENST00000556994 CILP2Q8IUL8 1156 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 RBM12BQ8IXT5 1001 aaKnown RBP11.39□□□□□ -0.59
SRP54-213ENST00000556994 ADGRG5Q8IZF4 528 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 TRPC4APQ8TEL6 797 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
SRP54-213ENST00000556994 TWIST2Q8WVJ9 160 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 LPPQ93052 612 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 MYLPFQ96A32 169 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 TUBGCP3Q96CW5 907 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 LRRC58Q96CX6 371 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 FCRL2Q96LA5 508 aaPredicted RBP11.39□□□□□ -0.59
SRP54-213ENST00000556994 PLEKHG4BQ96PX9 1271 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 NT5MQ9NPB1 228 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 MRGBPQ9NV56 204 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 MIOSQ9NXC5 875 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 ABCD2Q9UBJ2 740 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 KCNH4Q9UQ05 1017 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 NDUFAF1Q9Y375 327 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 FADS3Q9Y5Q0 445 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 CASTOR2A6NHX0 329 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 AQP12BA6NM10 295 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 B4GAT1O43505 415 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 HGFP14210 728 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TNK2Q07912 1038 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 GALNT1Q10472 559 aaPredicted RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 BNIP3Q12983 259 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 ATP6AP1Q15904 470 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 AARS2Q5JTZ9 985 aaKnown RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 Q6ZNX1 250 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 KIAA0408Q6ZU52 694 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 KCTD8Q6ZWB6 473 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 DPP9Q86TI2 863 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 CROCCP3Q8IVE0 287 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 AQP12AQ8IXF9 295 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 GPC2Q8N158 579 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 MIER2Q8N344 545 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 GPRC5AQ8NFJ5 357 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 SLC16A10Q8TF71 515 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 SMARCD1Q96GM5 515 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 CENPNQ96H22 339 aaPredicted RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 TEX37Q96LM6 180 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 GAD1Q99259 594 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 SEPHS2Q99611 448 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 HOPXQ9BPY8 73 aaPredicted RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 TUBB1Q9H4B7 451 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 FAIMQ9NVQ4 179 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TUBA8Q9NY65 449 aaPredicted RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 SLAMF8Q9P0V8 285 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 NYNRINQ9P2P1 1898 aaKnown RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 TRIM64CA6NLI5 447 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 SNAP29O95721 258 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 S1PR4O95977 384 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 AXLP30530 894 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 LHX1P48742 406 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 SERPINH1P50454 418 aaKnown RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 HERVK_113P63132 956 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 OGFOD2Q6N063 350 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 SCIMPQ6UWF3 145 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TFAP2DQ7Z6R9 452 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 MINDY1Q8N5J2 469 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 PACRGLQ8N7B6 248 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TNIP2Q8NFZ5 429 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 CALML6Q8TD86 181 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 ADAMTS16Q8TE57 1224 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 L3HYPDHQ96EM0 354 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 FEM1CQ96JP0 617 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 MYRFLQ96LU7 910 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TMEM74Q96NL1 305 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TMEM209Q96SK2 561 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 ERVK-6Q9BXR3 956 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 RGS18Q9NS28 235 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TMLHEQ9NVH6 421 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 POLR3BQ9NW08 1133 aaPredicted RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 ACTR3BQ9P1U1 418 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 TIMM22Q9Y584 194 aa11.38□□□□□ -0.59
SRP54-213ENST00000556994 BRCA1P38398 1863 aaKnown RBP11.38□□□□□ -0.59
SRP54-213ENST00000556994 J3KR12 359 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 AZIN1O14977 448 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 KPNA6O60684 536 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 GJB3O75712 270 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 BAIAP3O94812 1187 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 HSD17B1P14061 328 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 GFAPP14136 432 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 GJA5P36382 358 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 POLR2IP36954 125 aaKnown RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 ATP4BP51164 291 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CCR3P51677 355 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms