RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 SCAMP1O15126 338 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 LIASO43766 372 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 ZNF189O75820 626 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 AGTP01019 485 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 CSF2P04141 144 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 DGKAP23743 735 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 GPR1P46091 355 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 SIM1P81133 766 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 CCDC173Q0VFZ6 552 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 NFATC4Q14934 902 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 TCEA2Q15560 299 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 N4BP2L1Q5TBK1 243 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 ESRP1Q6NXG1 681 aaKnown RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 MACC1Q6ZN28 852 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 NYAP1Q6ZVC0 841 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 SLC25A45Q8N413 288 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 TSACCQ96A04 125 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 RIOK2Q9BVS4 552 aaKnown RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 TCEAL2Q9H3H9 227 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 WDR26Q9H7D7 661 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 ZFYVE1Q9HBF4 777 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 MAGEE1Q9HCI5 957 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 MOSPD1Q9UJG1 213 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 AAR2Q9Y312 384 aaKnown RBP17.06■□□□□ 0.32
PSEN1-217ENST00000556533 SPO11Q9Y5K1 396 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 TRPM6Q9BX84 2022 aa17.06■□□□□ 0.32
PSEN1-217ENST00000556533 LOC285095A0A1B0GVY8 99 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 GCATO75600 419 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 PIAS2O75928 621 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 IFNB1P01574 187 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 NME1P15531 152 aaKnown RBP17.05■□□□□ 0.32
PSEN1-217ENST00000556533 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
PSEN1-217ENST00000556533 GDF10P55107 478 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.32
PSEN1-217ENST00000556533 PPARDQ03181 441 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 C1orf61Q13536 156 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 SPARCL1Q14515 664 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 CDKN3Q16667 212 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 CCDC157Q569K6 752 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 ERMP1Q7Z2K6 904 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 NRSN1Q8IZ57 195 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 RBFAQ8N0V3 343 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 ATL2Q8NHH9 583 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 LMX1AQ8TE12 382 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 WDR92Q96MX6 357 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 LYSMD1Q96S90 227 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 CDC6Q99741 560 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 APOL2Q9BQE5 337 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 GORASP1Q9BQQ3 440 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 LGR4Q9BXB1 951 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 FRMD8P1Q9BZ68 369 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-217ENST00000556533 SLC13A1Q9BZW2 595 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 SUDS3Q9H7L9 328 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-217ENST00000556533 PKD2L2Q9NZM6 624 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 KLQ9UEF7 1012 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 PNMA8BQ9ULN7 279 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-217ENST00000556533 ZNF711Q9Y462 761 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 DOCK9Q9BZ29 2069 aa17.05■□□□□ 0.32
PSEN1-217ENST00000556533 TMEM202A6NGA9 273 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 AURKAO14965 403 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 CBFA2T3O75081 653 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 LDOC1O95751 146 aaPredicted RBP17.04■□□□□ 0.32
PSEN1-217ENST00000556533 EPOP01588 193 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 ATXN1LP0C7T5 689 aaKnown RBP17.04■□□□□ 0.32
PSEN1-217ENST00000556533 TSHRP16473 764 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 TRIM23P36406 574 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 SPINT3P49223 89 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 SRP54P61011 504 aaKnown RBP17.04■□□□□ 0.32
PSEN1-217ENST00000556533 OLIG2Q13516 323 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 SLC1A5Q15758 541 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 PARP6Q2NL67 630 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 ALG11Q2TAA5 492 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 PRRT3Q5FWE3 981 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 ALS2CLQ60I27 953 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 KANSL1Q7Z3B3 1105 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 HEATR4Q86WZ0 1026 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 PHACTR4Q8IZ21 702 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 ZNF548Q8NEK5 533 aaPredicted RBP17.04■□□□□ 0.32
PSEN1-217ENST00000556533 BLOC1S5Q8TDH9 187 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 MAIP1Q8WWC4 291 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 MS4A14Q96JA4 679 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 AGAP2Q99490 1192 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 FAM83DQ9H4H8 585 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 PHPT1Q9NRX4 125 aaPredicted RBP17.04■□□□□ 0.32
PSEN1-217ENST00000556533 FTSJ1Q9UET6 329 aa17.04■□□□□ 0.32
PSEN1-217ENST00000556533 APOBEC3BQ9UH17 382 aaKnown RBP17.04■□□□□ 0.32
PSEN1-217ENST00000556533 CACNA1EQ15878 2313 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 MED19A0JLT2 244 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-217ENST00000556533 NEMP2A6NFY4 417 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 PDE2AO00408 941 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-217ENST00000556533 USP12O75317 370 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 METTL18O95568 372 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
PSEN1-217ENST00000556533 CTSEP14091 401 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 HLA-DPA1P20036 260 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 KELP23276 732 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 STIP1P31948 543 aaKnown RBP17.03■□□□□ 0.32
PSEN1-217ENST00000556533 KIAA1024LP59773 190 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 DPTQ07507 201 aa17.03■□□□□ 0.32
PSEN1-217ENST00000556533 OASLQ15646 514 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms