RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MAXP61244 160 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 SKP1P63208 163 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 BIKQ13323 160 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 VGLL4Q14135 290 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.18
VTI1B-204ENST00000554659 TRIM40Q6P9F5 258 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 ABHD15Q6UXT9 468 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 KLHL32Q96NJ5 620 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 FAM124BQ9H5Z6 455 aaPredicted RBP13.96□□□□□ -0.18
VTI1B-204ENST00000554659 POLR3HQ9Y535 204 aaPredicted RBP13.96□□□□□ -0.18
VTI1B-204ENST00000554659 CCDC162PA2VCL2 907 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 NADKO95544 446 aaPredicted RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 OLR1P78380 273 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 SPIBQ01892 262 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 ENPEPQ07075 957 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 STX12Q86Y82 276 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 TRMT13Q9NUP7 481 aaKnown RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 THG1LQ9NWX6 298 aaKnown RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 GRHL1Q9NZI5 618 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 MDM4O15151 490 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 SUV39H1O43463 412 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 LRIG2O94898 1065 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 PRG2P13727 222 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 EPORP19235 508 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 ADRA1BP35368 520 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 LIMK2P53671 638 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 RBFAQ8N0V3 343 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 GPC2Q8N158 579 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 HPS1Q92902 700 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 CDCA5Q96FF9 252 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 TDRD1Q9BXT4 1180 aaKnown RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 GMEB1Q9Y692 573 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 TFECO14948 347 aaPredicted RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 ACADMP11310 421 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 EML3Q32P44 896 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 XKR6Q5GH73 641 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 FCRL2Q96LA5 508 aaPredicted RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 PRDM8Q9NQV8 689 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 AGO1Q9UL18 857 aaKnown RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 CARNS1A5YM72 827 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 MANSC4A6NHS7 340 aaPredicted RBP13.95□□□□□ -0.18
VTI1B-204ENST00000554659 SERPINA1P01009 418 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 MTTPP55157 894 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 GALNT3Q14435 633 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 C9orf57Q5W0N0 161 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 DCLRE1AQ6PJP8 1040 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 PPP1R16AQ96I34 528 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 CIB1Q99828 191 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 MTFR1LQ9H019 292 aa13.95□□□□□ -0.18
VTI1B-204ENST00000554659 IQCMA0A1B0GVH7 501 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 DPPA5A6NC42 116 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 C5orf60A6NFR6 353 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 CHURC1-FNTBB4DL54 471 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 PRKAG1P54619 331 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 C5orf22Q49AR2 442 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 HLA-DQA1Q5Y7H0 255 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 FBXL19Q6PCT2 694 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 DEFB128Q7Z7B8 93 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 NAT14Q8WUY8 206 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 RSPH9Q9H1X1 276 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 PHF11Q9UIL8 331 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 SSR3Q9UNL2 185 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 CLDN5O00501 218 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 GCATO75600 419 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 TRMUO75648 421 aaKnown RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 KLRC2P26717 231 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 MC4RP32245 332 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 HNMTP50135 292 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 CCDC157Q569K6 752 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 INTS6LQ5JSJ4 861 aaKnown RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 DOK6Q6PKX4 331 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 TMPRSS4Q9NRS4 437 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 ADGRE2Q9UHX3 823 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 NOCTQ9UK39 431 aaKnown RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 MFSD11O43934 449 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 ZBTB11O95625 1053 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 AP2A1O95782 977 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 MSX2P35548 267 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 CRYBB1P53674 252 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 BTG3Q14201 252 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 RNF44Q7L0R7 432 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 SLCO6A1Q86UG4 719 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 PDPRQ8NCN5 879 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 GIT1Q9Y2X7 761 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 COL1A2P08123 1366 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 MOXD2PA6NHM9 499 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 ARF4P18085 180 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 BEX3Q00994 111 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 TAF13Q15543 124 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms