RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 KATNAL2Q8IYT4 538 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 ATP6V0D2Q8N8Y2 350 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 FAM71BQ8TC56 605 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 UBE2Q2Q8WVN8 375 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 HSPH1Q92598 858 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 MYEOVQ96EZ4 313 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 BTN2A3PQ96KV6 586 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 NECTIN4Q96NY8 510 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 PSMB7Q99436 277 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 NAPGQ99747 312 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 PRMT1Q99873 361 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 MTG2Q9H4K7 406 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 DHX35Q9H5Z1 703 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 CFAP97Q9P2B7 532 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 CDC42EP3Q9UKI2 254 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 AGO1Q9UL18 857 aaKnown RBP6.46□□□□□ -1.38
SCFD1-212ENST00000554486 NEU3Q9UQ49 428 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 HS3ST4Q9Y661 456 aa6.46□□□□□ -1.38
SCFD1-212ENST00000554486 GOLGA6L7A0A1B0GV03 622 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 E2F8A0AVK6 867 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 LRRD1A4D1F6 860 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 KIF2AO00139 706 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 OPHN1O60890 802 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SRGAP2O75044 1071 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 LATS1O95835 1130 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 TUBB4AP04350 444 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 LAMP2P13473 410 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 ENPP1P22413 925 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 KDELR1P24390 212 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 IL4RP24394 825 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CASQ1P31415 396 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SLC6A4P31645 630 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CXCR5P32302 372 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CDKN2BP42772 138 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 HARS2P49590 506 aaKnown RBP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CDH6P55285 790 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 RWDD2BP57060 319 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 DPYSL3Q14195 570 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 PLEKHG6Q3KR16 790 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 ARL13BQ3SXY8 428 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 LEXMQ3ZCV2 418 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 MS4A13Q5J8X5 152 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 RAP1GAP2Q684P5 730 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 TRIM68Q6AZZ1 485 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 TANGO2Q6ICL3 276 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 RFWD3Q6PCD5 774 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 MFSD7Q6UXD7 560 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 LARP4Q71RC2 724 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 FAM124AQ86V42 546 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 DENND1CQ8IV53 801 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 BBS7Q8IWZ6 715 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 FAM217AQ8IXS0 508 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 RCOR2Q8IZ40 523 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CELF5Q8N6W0 485 aaKnown RBP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 UBL4BQ8N7F7 174 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 OR5AN1Q8NGI8 311 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 EXD1Q8NHP7 514 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 MAFAQ8NHW3 353 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SMARCD2Q92925 531 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 AZIN2Q96A70 460 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 FAF2Q96CS3 445 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 P2RY11Q96G91 374 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 AJUBAQ96IF1 538 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 C1orf74Q96LT6 269 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 OSBPL9Q96SU4 736 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 HERPUD2Q9BSE4 406 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 PLA2G2FQ9BZM2 168 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 DCLK3Q9C098 648 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SIK2Q9H0K1 926 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 KIF9Q9HAQ2 790 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CWC15Q9P013 229 aaKnown RBP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 KCMF1Q9P0J7 381 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 EPS15L1Q9UBC2 864 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 OR12D3Q9UGF7 316 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SLC12A6Q9UHW9 1150 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 STOML2Q9UJZ1 356 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SNX12Q9UMY4 172 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 SH3BP1Q9Y3L3 701 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 ZFP37Q9Y6Q3 630 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-212ENST00000554486 NUMBLQ9Y6R0 609 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 CHD5Q8TDI0 1954 aa6.45□□□□□ -1.38
SCFD1-212ENST00000554486 UNC80Q8N2C7 3258 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 IGLV3-10A0A075B6K4 115 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 hCG_1818297A0A087WSY0 165 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 A0A0G2JNJ9 132 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 DRGXA6NNA5 263 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 HEPACAM2A8MVW5 462 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF487B1APH4 448 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 C2CD4DB7Z1M9 353 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 E9PAM4 449 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ANHXE9PGG2 379 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 TRDMT1O14717 391 aaKnown RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF185O15231 689 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA12O60330 932 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDH8O95206 1070 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms