RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 BFARQ9NZS9 450 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 DEC1Q9P2X7 70 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 ZNF212Q9UDV6 495 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 SUN2Q9UH99 717 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 FAM153AQ9UHL3 310 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 RSPH14Q9UHP6 348 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 RAPGEFL1Q9UHV5 662 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 GGA2Q9UJY4 613 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 FBXO10Q9UK96 956 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 NFU1Q9UMS0 254 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 PLA2G4CQ9UP65 541 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 SHOC2Q9UQ13 582 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 NEU3Q9UQ49 428 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 ATP8A1Q9Y2Q0 1164 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 MFHAS1Q9Y4C4 1052 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 USP15Q9Y4E8 981 aaPredicted RBP5.07□□□□□ -1.6
VTI1B-202ENST00000553619 WNT6Q9Y6F9 365 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 CEP290O15078 2479 aa5.07□□□□□ -1.6
VTI1B-202ENST00000553619 A0A0D9SEW6 157 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 SDR42E2A6NKP2 422 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 SLC22A31A6NKX4 558 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 J3KR12 359 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PRRG2O14669 202 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 MBTPS2O43462 519 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CACNG3O60359 315 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 TBX10O75333 385 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 SPAG6O75602 509 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ATE1O95260 518 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 POP4O95707 220 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 AP2A1O95782 977 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 EPOP01588 193 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 APODP05090 189 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CYP17A1P05093 508 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 APRTP07741 180 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 SRPRAP08240 638 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GSTA2P09210 222 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ZSCAN5DPP0CG00 497 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GLULP15104 373 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 VAV1P15498 845 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 TSHRP16473 764 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 KCNA5P22460 613 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GDI1P31150 447 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PHBP35232 272 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ACVRL1P37023 503 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CSKP41240 450 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 MAGEA6P43360 314 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 RECQLP46063 649 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GALK1P51570 392 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PMS2P54278 862 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 RHOAP61586 193 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PFKPQ01813 784 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 TEKQ02763 1124 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 DLX2Q07687 328 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 WASHC5Q12768 1159 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CDH17Q12864 832 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 LMAN2Q12907 356 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 NR0B2Q15466 257 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 AAK1Q2M2I8 961 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ITPRIPL2Q3MIP1 535 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 LEXMQ3ZCV2 418 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ACCSLQ4AC99 568 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 HABP4Q5JVS0 413 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 RNASEH2BQ5TBB1 312 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ALS2CLQ60I27 953 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 MBLAC2Q68D91 279 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GRAMD4Q6IC98 578 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CXorf57Q6NSI4 855 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 LRRC8BQ6P9F7 803 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 VITQ6UXI7 678 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 B4GALNT4Q76KP1 1039 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 NLRC3Q7RTR2 1065 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 KIAA0907Q7Z7F0 614 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PALM2Q8IXS6 379 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ZCCHC9Q8N567 271 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CCDC33Q8N5R6 958 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 DEFB123Q8N688 67 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PCDH20Q8N6Y1 951 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 NAT8LQ8N9F0 302 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 DNAAF3Q8N9W5 541 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ATP11CQ8NB49 1132 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 KDM1BQ8NB78 822 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 FBXO25Q8TCJ0 367 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 USP33Q8TEY7 942 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PYROXD1Q8WU10 500 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PPM1EQ8WY54 764 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CPT1BQ92523 772 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 CAVIN3Q969G5 261 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 TTC17Q96AE7 1141 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 ALG14Q96F25 216 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 MSANTD3Q96H12 275 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PRICKLE1Q96MT3 831 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PSKH2Q96QS6 385 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 RBM15Q96T37 977 aaKnown RBP eCLIP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 RUFY1Q96T51 708 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 FSD1LQ9BXM9 530 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GBA3Q9H227 469 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms