RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PAPSS1O43252 624 aaPredicted RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 ADAM20O43506 726 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 DNTTP04053 509 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 TMEM11P17152 192 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 CD58P19256 250 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 GPTP24298 496 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 EIF2S3P41091 472 aaKnown RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 METAP2P50579 478 aaKnown RBP eCLIP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 MRPL12P52815 198 aaKnown RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 MFAP4P55083 255 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 TAS2R40P59535 323 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 ZBED6P86452 979 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 PPATQ06203 517 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 NAB2Q15742 525 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 EIF2S3LQ2VIR3 472 aaKnown RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 MFSD4BQ5TF39 518 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 TMCO3Q6UWJ1 677 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 Q6ZTK2 550 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 SPATA6LQ8N4H0 392 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 AADATQ8N5Z0 425 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 POC5Q8NA72 575 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 MIGA1Q8NAN2 632 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 C1orf131Q8NDD1 294 aaKnown RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 JAKMIP2Q96AA8 810 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 SLC22A18Q96BI1 424 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 HAUS8Q9BT25 410 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 PPP1R3EQ9H7J1 279 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 LTB4R2Q9NPC1 389 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 CWC15Q9P013 229 aaKnown RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 SEC63Q9UGP8 760 aaKnown RBP5.25□□□□□ -1.57
SYNE2-210ENST00000553455 PADI1Q9ULC6 663 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 CLIC4Q9Y696 253 aa5.25□□□□□ -1.57
SYNE2-210ENST00000553455 DNAJC9-AS1A6NH13 148 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 SH2B2O14492 632 aaPredicted RBP5.24□□□□□ -1.57
SYNE2-210ENST00000553455 CTDSP2O14595 271 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 ATP2A1O14983 1001 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 RGS14O43566 566 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 JRKO75564 520 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 CYP1A2P05177 515 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 G6PDP11413 515 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 NRIP1P48552 1158 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 HSD17B4P51659 736 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 TFAP4Q01664 338 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 EFNB3Q15768 340 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 TMEM198Q66K66 360 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 B3GNT6Q6ZMB0 384 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 SHFQ7M4L6 423 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 PRPF39Q86UA1 669 aaKnown RBP5.24□□□□□ -1.57
SYNE2-210ENST00000553455 SAT2Q96F10 170 aaPredicted RBP5.24□□□□□ -1.57
SYNE2-210ENST00000553455 EGLN2Q96KS0 407 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 PCGF1Q9BSM1 259 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 SPRY4Q9C004 299 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 MMP25Q9NPA2 562 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 R3HDM2Q9Y2K5 976 aaKnown RBP5.24□□□□□ -1.57
SYNE2-210ENST00000553455 CMAHPQ9Y471 501 aa5.24□□□□□ -1.57
SYNE2-210ENST00000553455 ARHGEF40Q8TER5 1519 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 SYNDIG1LA6NDD5 238 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 A8MV72 311 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 AKR1B15C9JRZ8 316 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 SOCS2O14508 198 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 PPEF2O14830 753 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 HSPA12AO43301 675 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 ITM2AO43736 263 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 PPFIA2O75334 1257 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 DAB1O75553 588 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 SYF2O95926 243 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 PSG1P11464 419 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 ANXA7P20073 488 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 HNRNPH1P31943 449 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 ENTPD1P49961 510 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 MRPS34P82930 218 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 NEDD9Q14511 834 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 C11orf87Q6NUJ2 197 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 METTL2BQ6P1Q9 378 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 COLCA1Q6ZS62 124 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 KBTBD6Q86V97 674 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 FOXRED2Q8IWF2 684 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 HACE1Q8IYU2 909 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 TRPC4APQ8TEL6 797 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 CCDC34Q96HJ3 373 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 METTL2AQ96IZ6 378 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 FIZ1Q96SL8 496 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 GAD1Q99259 594 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 TEX12Q9BXU0 123 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 TXLNGYQ9BZA5 131 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 NDST4Q9H3R1 872 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 PAG1Q9NWQ8 432 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 MTMR10Q9NXD2 777 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 ELOVL5Q9NYP7 299 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 MRPL15Q9P015 296 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 SLC9A2Q9UBY0 812 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 RCOR1Q9UKL0 485 aa5.23□□□□□ -1.57
SYNE2-210ENST00000553455 PTRH2Q9Y3E5 179 aaKnown RBP5.23□□□□□ -1.57
SYNE2-210ENST00000553455 IGHV4-28A0A0C4DH34 117 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 RPS10-NUDT3A0A1W2PQS6 291 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 H3BQ06 376 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-210ENST00000553455 OGG1O15527 345 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 SPRY3O43610 288 aa5.22□□□□□ -1.57
SYNE2-210ENST00000553455 MITFO75030 526 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-210ENST00000553455 MOSPD3O75425 235 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms