RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ETV5P41161 510 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 BCL2L1Q07817 233 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 NFATC3Q12968 1075 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 ARHGEF7Q14155 803 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 PIGHQ14442 188 aaPredicted RBP11.86□□□□□ -0.51
CKAP4-202ENST00000552828 MANEAQ5SRI9 462 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 PRICKLE2Q7Z3G6 844 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 ZFAND4Q86XD8 727 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 ARHGAP12Q8IWW6 846 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 SPC24Q8NBT2 197 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 CCL4L1Q8NHW4 92 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 KIAA1524Q8TCG1 905 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 USP7Q93009 1102 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 NSMCE3Q96MG7 304 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 PSKH2Q96QS6 385 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 PACSIN1Q9BY11 444 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 FAM117AQ9C073 453 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 DPEP2Q9H4A9 486 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 CTTNBP2NLQ9P2B4 639 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 UVRAGQ9P2Y5 699 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 IP6K2Q9UHH9 426 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 ANAPC7Q9UJX3 599 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 LRP4O75096 1905 aa11.86□□□□□ -0.51
CKAP4-202ENST00000552828 PTPN13Q12923 2485 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 PRSS38A1L453 326 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 B4DGG1 531 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 EEF2KO00418 725 aaKnown RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 HGSO14964 777 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 SUV39H1O43463 412 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 PRPSAP2O60256 369 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 FUCA1P04066 466 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 FGF1P05230 155 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 MYCLP1P12525 358 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 CCNB1P14635 433 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 MIPP30301 263 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 PCK1P35558 622 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 CYLC1P35663 651 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 HCAR3P49019 387 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 AP1S1P61966 158 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 IL10RBQ08334 325 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 C16orf72Q14CZ0 275 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 SPA17Q15506 151 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 TBR1Q16650 682 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 CA9Q16790 459 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ERMARDQ5T6L9 678 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ZNF574Q6ZN55 896 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 RFX8Q6ZV50 586 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 PIM3Q86V86 326 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 NRROSQ86YC3 692 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ARFGAP1Q8N6T3 406 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ZNF564Q8TBZ8 553 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 ARHGAP9Q9BRR9 750 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 LUC7LQ9NQ29 371 aaKnown RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 TRNAU1APQ9NX07 287 aaKnown RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 KCTD5Q9NXV2 234 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 PCSK1NQ9UHG2 260 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 LCMT1Q9UIC8 334 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 INTUQ9ULD6 942 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 PCDHB11Q9Y5F2 797 aa11.85□□□□□ -0.51
CKAP4-202ENST00000552828 HEMK1Q9Y5R4 338 aaPredicted RBP11.85□□□□□ -0.51
CKAP4-202ENST00000552828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.84□□□□□ -0.51
CKAP4-202ENST00000552828 A0A1W2PQ67 120 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 HTRA2O43464 458 aaPredicted RBP11.84□□□□□ -0.51
CKAP4-202ENST00000552828 LRCH4O75427 683 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 IPO7O95373 1038 aaKnown RBP11.84□□□□□ -0.51
CKAP4-202ENST00000552828 LCA5LO95447 670 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 CEACAM5P06731 702 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 FAM87AP0C7U9 286 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 ERCC2P18074 760 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
CKAP4-202ENST00000552828 FECHP22830 423 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 TEAD1P28347 426 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 MAGEA1P43355 309 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 GPR3P46089 330 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 SCNN1BP51168 640 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 RENBPP51606 427 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 ZNF135P52742 658 aaPredicted RBP11.84□□□□□ -0.51
CKAP4-202ENST00000552828 OR1D5P58170 312 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 SQSTM1Q13501 440 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 PHF19Q5T6S3 580 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 TMEM164Q5U3C3 297 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 ARHGAP36Q6ZRI8 547 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 VASH2Q86V25 355 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 PSTKQ8IV42 348 aaKnown RBP11.84□□□□□ -0.51
CKAP4-202ENST00000552828 NPWQ8N729 165 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 NIPA2Q8N8Q9 360 aa11.84□□□□□ -0.51
CKAP4-202ENST00000552828 BTBD6Q96KE9 485 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms