RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 R3HDM2Q9Y2K5 976 aaKnown RBP18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 CACNA1AO00555 2505 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 A0A0U1RQS6 177 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 NEMP2A6NFY4 417 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 CBFA2T3O75081 653 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 PYGLP06737 847 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 ALPPL2P10696 532 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 HLA-DPA1P20036 260 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 DGKAP23743 735 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 PSMB4P28070 264 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 GPR1P46091 355 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 FOXK2Q01167 660 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 EIF2B5Q13144 721 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 KDELC1Q6UW63 502 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 ZNF765Q7L2R6 523 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 LYSMD3Q7Z3D4 306 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 TECPR1Q7Z6L1 1165 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 HID1Q8IV36 788 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 RAVER1Q8IY67 606 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 NRSN1Q8IZ57 195 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 SLC25A41Q8N5S1 370 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 FAM71DQ8N9W8 422 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 SLC35B2Q8TB61 432 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 MAIP1Q8WWC4 291 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 ATG4AQ8WYN0 398 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 TLR10Q9BXR5 811 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 ZFYVE1Q9HBF4 777 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 MAGEE1Q9HCI5 957 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 TRMT1Q9NXH9 659 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 SPASTQ9UBP0 616 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 SHOC2Q9UQ13 582 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 AAR2Q9Y312 384 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 ZNF711Q9Y462 761 aa18.45■□□□□ 0.54
PRPF40B-216ENST00000552301 FFAR2O15552 330 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 KIF5CO60282 957 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 CEP104O60308 925 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 RASGRP1O95267 797 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 EPOP01588 193 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 PIRTP0C851 137 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 MYCLP1P12525 358 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 PTSQ03393 145 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 N4BP2L1Q5TBK1 243 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 HEATR4Q86WZ0 1026 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 RBFAQ8N0V3 343 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 CBARPQ8N350 705 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 ZNF548Q8NEK5 533 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 BAHD1Q8TBE0 780 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 LMX1AQ8TE12 382 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 FUBP1Q96AE4 644 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 CNDP2Q96KP4 475 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 MRGPRX2Q96LB1 330 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 FICDQ9BVA6 458 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 ABCG8Q9H221 673 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 USP29Q9HBJ7 922 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 RAD18Q9NS91 495 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 APOBEC2Q9Y235 224 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 JRKLQ9Y4A0 524 aa18.44■□□□□ 0.54
PRPF40B-216ENST00000552301 MED19A0JLT2 244 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 C5orf60A6NFR6 353 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 K7ESM1 405 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 TNFSF14O43557 240 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 LDOC1O95751 146 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 FGF1P05230 155 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 HOXC4P09017 264 aaPredicted RBP18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 CTSEP14091 401 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 TEAD1P28347 426 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 ACTN2P35609 894 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 TRIM23P36406 574 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 SPINT3P49223 89 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 SRP54P61011 504 aaKnown RBP18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 DPTQ07507 201 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 CCDC173Q0VFZ6 552 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 P3H1Q32P28 736 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 PRRT3Q5FWE3 981 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 ZNF569Q5MCW4 686 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 RFLNAQ6ZTI6 216 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 KANSL1Q7Z3B3 1105 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 RD3Q7Z3Z2 195 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 GLRX5Q86SX6 157 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 REXO1L1PQ8IX06 675 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 SCAMP4Q969E2 229 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 TMEM121Q9BTD3 319 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 UCKL1Q9NWZ5 548 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 HACD3Q9P035 362 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 MOSPD1Q9UJG1 213 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 ZNF148Q9UQR1 794 aa18.43■□□□□ 0.54
PRPF40B-216ENST00000552301 LOC285095A0A1B0GVY8 99 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 RGSL1A5PLK6 1076 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 ENC1O14682 589 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 AQP9O43315 295 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 LIASO43766 372 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 FGGP02679 453 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 ADRB1P08588 477 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 HK3P52790 923 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 CDK3Q00526 305 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 SLC1A5Q15758 541 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 ALG11Q2TAA5 492 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 SIRPB2Q5JXA9 342 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 PELI3Q8N2H9 469 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 SLC25A45Q8N413 288 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms