RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZFATQ9P243 1243 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 HECAQ9UBI9 543 aaPredicted RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 COQ6Q9Y2Z9 468 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 COQ4Q9Y3A0 265 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ANKRD12Q6UB98 2062 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 STAB1Q9NY15 2570 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 ZNF106Q9H2Y7 1883 aaKnown RBP5.41□□□□□ -1.54
HOXB3-213ENST00000552000 NBEAL1Q6ZS30 2694 aa5.41□□□□□ -1.54
HOXB3-213ENST00000552000 TMEM110-MUSTN1A8MSY1 372 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 RHPN2P1A8MT19 583 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 MKRN2OSH3BPM6 223 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 KRIT1O00522 736 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 CETN3O15182 167 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 NUDT21O43809 227 aaKnown RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 YEATS4O95619 227 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 DDAH2O95865 285 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 PCCBP05166 539 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 HTR1BP28222 390 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 OR1E1P30953 314 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ME1P48163 572 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 COPB1P53618 953 aaKnown RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ARF5P84085 180 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 MC1RQ01726 317 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 SLC20A2Q08357 652 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 TRA2AQ13595 282 aaKnown RBP eCLIP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 CUL4AQ13619 759 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 LRRC14Q15048 493 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 EIF2S3LQ2VIR3 472 aaKnown RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ZCWPW2Q504Y3 356 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ATXN7L2Q5T6C5 722 aaPredicted RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 C1QL3Q5VWW1 255 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 NKAIN2Q5VXU1 208 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ANKS6Q68DC2 871 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 FOXR2Q6PJQ5 311 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 KDELC2Q7Z4H8 507 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 SETD3Q86TU7 594 aaPredicted RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 TTC7BQ86TV6 843 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 FAM129CQ86XR2 697 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 CCDC13Q8IYE1 715 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 PPM1KQ8N3J5 372 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 TSEN2Q8NCE0 465 aaKnown RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 AGBL5Q8NDL9 886 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 NLGN4YQ8NFZ3 816 aaPredicted RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ATL2Q8NHH9 583 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 CCL4L1Q8NHW4 92 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 RNF31Q96EP0 1072 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 NT5C1BQ96P26 610 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 SLC2A13Q96QE2 648 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 MED15Q96RN5 788 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 RBM15Q96T37 977 aaKnown RBP eCLIP5.4□□□□□ -1.543e-7■■■■□ 23.3
HOXB3-213ENST00000552000 CTRCQ99895 268 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 EFHD1Q9BUP0 239 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 DDA1Q9BW61 102 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ASPSCR1Q9BZE9 553 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 INTS2Q9H0H0 1204 aaKnown RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 TMEM168Q9H0V1 697 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 DPEP2Q9H4A9 486 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ATP13A1Q9HD20 1204 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 ANLNQ9NQW6 1124 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 MOSPD1Q9UJG1 213 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 PILRAQ9UKJ1 303 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 PCDHA7Q9UN72 937 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 OR1A2Q9Y585 309 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 MRPS18BQ9Y676 258 aaKnown RBP5.4□□□□□ -1.54
HOXB3-213ENST00000552000 KCNMB2Q9Y691 235 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 DGKBQ9Y6T7 804 aa5.4□□□□□ -1.54
HOXB3-213ENST00000552000 CSMD2Q7Z408 3487 aa5.4□□□□□ -1.55
HOXB3-213ENST00000552000 CROCCQ5TZA2 2017 aa5.4□□□□□ -1.55
HOXB3-213ENST00000552000 CCDC88CQ9P219 2028 aa5.4□□□□□ -1.55
HOXB3-213ENST00000552000 DOCK10Q96BY6 2186 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ILVBLA1L0T0 632 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 HMX2A2RU54 273 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ANKRD33BA6NCL7 494 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 WIPF3A6NGB9 483 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 B4E171 279 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 I6L893 689 aaPredicted RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 HSF2BPO75031 334 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 RFPL1O75677 317 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 SASH3O75995 380 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 RHOBTB3O94955 611 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 LETM1O95202 739 aaPredicted RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 POP4O95707 220 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 CD160O95971 181 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 PDGFAP04085 211 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 KRT5P13647 590 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 XPAP23025 273 aaPredicted RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 MAP4P27816 1152 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 GRNP28799 593 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 CD1CP29017 333 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 CSF2RBP32927 897 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ACVRL1P37023 503 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TSPAN7P41732 249 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 IDH3AP50213 366 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 LIMK2P53671 638 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 DPYDQ12882 1025 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 PDCLQ13371 301 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 MRPL49Q13405 166 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms