RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 RASGEF1CQ8N431 466 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 SLC25A41Q8N5S1 370 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 DEFB124Q8NES8 71 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 IPMKQ8NFU5 416 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 ATG4AQ8WYN0 398 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 NUS1Q96E22 293 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 OXNAD1Q96HP4 312 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-225ENST00000551845 MRGPRX2Q96LB1 330 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 OSBPL9Q96SU4 736 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 APOOQ9BUR5 198 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 FSD1LQ9BXM9 530 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 GPR63Q9BZJ6 419 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 SLC32A1Q9H598 525 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 IL21RQ9HBE5 538 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 ZFYVE1Q9HBF4 777 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 TTC7AQ9ULT0 858 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-225ENST00000551845 PCDHGB2Q9Y5G2 931 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTCH1-225ENST00000551845 EML5Q05BV3 1969 aa10.62□□□□□ -0.71
PTCH1-225ENST00000551845 SPTY2D1-AS1A0A0U1RR47 76 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 CACNB4O00305 520 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 PCDHGA12O60330 932 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 ZIC2O95409 532 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 AGTP01019 485 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 PCCBP05166 539 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 PYGLP06737 847 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 TCP1P17987 556 aaKnown RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 HLA-DPA1P20036 260 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 PSMB4P28070 264 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 IGFALSP35858 605 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 TRIM23P36406 574 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 CCT8P50990 548 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 GDF10P55107 478 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 IRF4Q15306 451 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 OASLQ15646 514 aaKnown RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 SLC1A5Q15758 541 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 CDKN3Q16667 212 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 C19orf48Q6RUI8 117 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 ENPP7Q6UWV6 458 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 RANBP10Q6VN20 620 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 DBX2Q6ZNG2 339 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 GSTA5Q7RTV2 222 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 TMC3Q7Z5M5 1100 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 CCDC89Q8N998 374 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 ATL2Q8NHH9 583 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 SETD7Q8WTS6 366 aaKnown RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 AP2M1Q96CW1 435 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 DTD2Q96FN9 168 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 SMIM14Q96QK8 99 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 FAM83DQ9H4H8 585 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 TRABDQ9H4I3 376 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 RAD18Q9NS91 495 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 PKD2L2Q9NZM6 624 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 HACD3Q9P035 362 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 FEZ2Q9UHY8 353 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 SNX12Q9UMY4 172 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 FNDC3AQ9Y2H6 1198 aaKnown RBP10.61□□□□□ -0.71
PTCH1-225ENST00000551845 NEUROG3Q9Y4Z2 214 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 NUMA1Q14980 2115 aa10.61□□□□□ -0.71
PTCH1-225ENST00000551845 A0A0U1RQS6 177 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 CES2O00748 559 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 METTL18O95568 372 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 CSF2P04141 144 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 FGF1P05230 155 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 HOXC4P09017 264 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-225ENST00000551845 CD59P13987 128 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 TSHRP16473 764 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 GM2AP17900 193 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 KELP23276 732 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 GPR1P46091 355 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 BLKP51451 505 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 STC1P52823 247 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 HNRNPKP61978 463 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCH1-225ENST00000551845 DPTQ07507 201 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 BNIP3Q12983 259 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 FZD2Q14332 565 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 SIX1Q15475 284 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-225ENST00000551845 SIRPB2Q5JXA9 342 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 ESRP1Q6NXG1 681 aaKnown RBP10.6□□□□□ -0.71
PTCH1-225ENST00000551845 C4orf22Q6V702 233 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 PARGQ86W56 976 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 SLC22A18ASQ8N1D0 253 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 PLA2G15Q8NCC3 412 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 ACTRT1Q8TDG2 376 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 COG1Q8WTW3 980 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 BTN2A2Q8WVV5 523 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 MAGOHBQ96A72 148 aaKnown RBP10.6□□□□□ -0.71
PTCH1-225ENST00000551845 RTP4Q96DX8 246 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 MS4A14Q96JA4 679 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 CDH19Q9H159 772 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 ABCG8Q9H221 673 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 GPR27Q9NS67 375 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 PAK5Q9P286 719 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 KLK13Q9UKR3 277 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 MSRB2Q9Y3D2 182 aa10.6□□□□□ -0.71
PTCH1-225ENST00000551845 NYNRINQ9P2P1 1898 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms