RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 NCKIPSDQ9NZQ3 722 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 ZHX1Q9UKY1 873 aaPredicted RBP5.53□□□□□ -1.52
CPSF6-206ENST00000550987 FAM96BQ9Y3D0 163 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 ADAM18Q9Y3Q7 739 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 CLDN16Q9Y5I7 305 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 WDFY3Q8IZQ1 3526 aa5.53□□□□□ -1.52
CPSF6-206ENST00000550987 AOX1Q06278 1338 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CYP2D7A0A087X1C5 515 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 BTBD18B2RXH4 712 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 TARM1B6A8C7 271 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 RRHO14718 337 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 SLC25A17O43808 307 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 FOXD2O60548 495 aaPredicted RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 RB1P06400 928 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CHRM5P08912 532 aaPredicted RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CD63P08962 238 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 TNFRSF1AP19438 455 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CIITAP33076 1130 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 COPB2P35606 906 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 NBL1P41271 181 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 SOX2P48431 317 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 RRP1P56182 461 aaKnown RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 SIM1P81133 766 aaPredicted RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CEBPZQ03701 1054 aaKnown RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 SRSF1Q07955 248 aaKnown RBP eCLIP5.52□□□□□ -1.531e-6■■■■□ 21.4
CPSF6-206ENST00000550987 NIPAL4Q0D2K0 466 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CSTF3Q12996 717 aaKnown RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CDC16Q13042 620 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 ARHGEF6Q15052 776 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 RPE65Q16518 533 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 ALDH1L2Q3SY69 923 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 RAB41Q5JT25 222 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 MIIPQ5JXC2 388 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 FNDC7Q5VTL7 733 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 CRELD2Q6UXH1 353 aaPredicted RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 RBM44Q6ZP01 1051 aaKnown RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 FAM83HQ6ZRV2 1179 aaPredicted RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 TTLL10Q6ZVT0 673 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 WDR5BQ86VZ2 330 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 KIAA2013Q8IYS2 634 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 PNLDC1Q8NA58 520 aaKnown RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 ZFPM2Q8WW38 1151 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 PSPC1Q8WXF1 523 aaKnown RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 BBC3Q96PG8 261 aaPredicted RBP5.52□□□□□ -1.53
CPSF6-206ENST00000550987 C1QTNF3Q9BXJ4 246 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 TEX12Q9BXU0 123 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 HIPK3Q9H422 1215 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 KIF9Q9HAQ2 790 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 PDE7BQ9NP56 450 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 SLC17A6Q9P2U8 582 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 TRIOO75962 3097 aa5.52□□□□□ -1.53
CPSF6-206ENST00000550987 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.51□□□□□ -1.53
CPSF6-206ENST00000550987 A0A0U1RQG5 324 aaPredicted RBP5.51□□□□□ -1.53
CPSF6-206ENST00000550987 A0A1W2PRG0 241 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 INPPL1O15357 1258 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 PAGE4O60829 102 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 DDAH2O95865 285 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 YWHAQP27348 245 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 PIP4K2AP48426 406 aaPredicted RBP5.51□□□□□ -1.53
CPSF6-206ENST00000550987 ME3Q16798 604 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 HECTD2Q5U5R9 776 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 LRIG3Q6UXM1 1119 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 AMIGO2Q86SJ2 522 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 TDRPQ86YL5 185 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 ADGRF4Q8IZF3 695 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 ZCCHC9Q8N567 271 aaKnown RBP5.51□□□□□ -1.53
CPSF6-206ENST00000550987 POC5Q8NA72 575 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 KCTD6Q8NC69 237 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 RASSF8Q8NHQ8 419 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 P2RY11Q96G91 374 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 FRG2BQ96QU4 278 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 APOL6Q9BWW8 343 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 TM2D2Q9BX73 214 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 STRA6Q9BX79 667 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 SCPEP1Q9HB40 452 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 SH3GLB2Q9NR46 395 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 SUCLA2Q9P2R7 463 aaPredicted RBP5.51□□□□□ -1.53
CPSF6-206ENST00000550987 MORF4L1Q9UBU8 362 aa5.51□□□□□ -1.53
CPSF6-206ENST00000550987 AAR2Q9Y312 384 aaKnown RBP5.51□□□□□ -1.53
CPSF6-206ENST00000550987 USP42Q9H9J4 1324 aaKnown RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 FAM157AC9JC47 383 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 CTDSP2O14595 271 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SEC14L5O43304 696 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SLC25A12O75746 678 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 PLAUP00749 431 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 TFP02787 698 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 HEXAP06865 529 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 ADRB2P07550 413 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 NR2F1P10589 423 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 PCNAP12004 261 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 TMEM11P17152 192 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 PTPN2P17706 415 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 TFEBP19484 476 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 GPD1P21695 349 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 PIK3CAP42336 1068 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 PMPCAQ10713 525 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 IRF3Q14653 427 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 RNPS1Q15287 305 aaKnown RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 NTRK2Q16620 822 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms