RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SLC35B2Q8TB61 432 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 HDAC10Q969S8 669 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 CDT1Q9H211 546 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 CHRAC1Q9NRG0 131 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 IFT80Q9P2H3 777 aaPredicted RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SNX6Q9UNH7 406 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SAMD4AQ9UPU9 718 aaKnown RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 PRRG1O14668 218 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 EI24O14681 340 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 C4BPAP04003 597 aaKnown RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 NR2F6P10588 404 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 POLR2JP52435 117 aaKnown RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SEMA5AQ13591 1074 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 UGCGQ16739 394 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC9B1Q4ZJI4 515 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 NCCRP1Q6ZVX7 275 aaPredicted RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 IZUMO1Q8IYV9 350 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 CDK20Q8IZL9 346 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 ASB9Q96DX5 294 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 MED8Q96G25 268 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 ATP13A1Q9HD20 1204 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 CMTM6Q9NX76 183 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 RFXANKO14593 260 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SH3BGRLO75368 114 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 TULP3O75386 442 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 DHFRP00374 187 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 PENKP01210 267 aaPredicted RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 CENPAP49450 140 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SCN1BQ07699 218 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 BOP1Q14137 746 aaKnown RBP15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 AHSA2Q719I0 299 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 VN1R5Q7Z5H4 357 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 IL31RAQ8NI17 732 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 MFSD3Q96ES6 412 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 STOML2Q9UJZ1 356 aa15.8■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC28A1O00337 649 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 GCATO75600 419 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 KLHL18O94889 574 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ANXA5P08758 320 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ENTPD1P49961 510 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 POU5F1Q01860 360 aaKnown RBP15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 MPP2Q14168 576 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 PITRM1Q5JRX3 1037 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 NEK5Q6P3R8 708 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 XKR5Q6UX68 686 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 FRMD7Q6ZUT3 714 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 GPC2Q8N158 579 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 C7orf43Q8WVR3 580 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 PANX1Q96RD7 426 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 GLIS2Q9BZE0 524 aaPredicted RBP15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ST6GALNAC4Q9H4F1 302 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ITM2BQ9Y287 266 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 IRF8Q02556 426 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 CLEC6AQ6EIG7 209 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 OR6B1O95007 311 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 SNHG28P0DPA3 235 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 PTPN1P18031 435 aaKnown RBP15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 STARD3Q14849 445 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC26A9Q7LBE3 791 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 CARNMT1Q8N4J0 409 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 TWIST2Q8WVJ9 160 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 C12orf43Q96C57 262 aaKnown RBP15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 IGSF9Q9P2J2 1179 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 TMED5Q9Y3A6 229 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 C9JVG2 144 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 NOS3P29474 1203 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC9A4Q6AI14 798 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 OVOS1Q6IE37 1185 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 PAOXQ6QHF9 649 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 MACC1Q6ZN28 852 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 STRADAQ7RTN6 431 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 PACRGLQ8N7B6 248 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ZNF614Q8N883 585 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 HASPINQ8TF76 798 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ITCHQ96J02 903 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 PKP2Q99959 881 aa15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 ZNF395Q9H8N7 513 aaPredicted RBP15.79■□□□□ 0.12
RBFOX1-212ENST00000550418 CASTOR2A6NHX0 329 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 PCP4L1A6NKN8 68 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 AQP12BA6NM10 295 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 YDJCA8MPS7 323 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 KLRC2P26717 231 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 KPNA1P52294 538 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 NRG1Q02297 640 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 HERC3Q15034 1050 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 MOGQ16653 247 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 TEX44Q53QW1 395 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ADAMTSL2Q86TH1 951 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 AQP12AQ8IXF9 295 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 CHCHD6Q9BRQ6 235 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 YTHDF1Q9BYJ9 559 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 PTGFRNQ9P2B2 879 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 POLR3HQ9Y535 204 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SUV39H1O43463 412 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ITM2AO43736 263 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 RFX3P48380 749 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ALFQ53S48 1182 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 PPP1R26Q5T8A7 1209 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms