RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ADGRG4Q8IZF6 3080 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 APCP25054 2843 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 ANKRD36A6QL64 1941 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 CFAP69A5D8W1 941 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 RASA4BC9J798 803 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 K7EM74 188 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 FGF10O15520 208 aaPredicted RBP12.22□□□□□ -0.45
DDX54-206ENST00000549271 RASA4O43374 803 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 B4GAT1O43505 415 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 RAD1O60671 282 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 CPNE6O95741 557 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 SERPING1P05155 500 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 PRKAR1AP10644 381 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 ITIH2P19823 946 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 NR1D1P20393 614 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 PSMA2P25787 234 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 CSNK1DP48730 415 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 LRRC14Q15048 493 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 IRF4Q15306 451 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 CYTH1Q15438 398 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 CA9Q16790 459 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 UGP2Q16851 508 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 WSCD2Q2TBF2 565 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 C14orf28Q4W4Y0 310 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 NYAP1Q6ZVC0 841 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 CYP4V2Q6ZWL3 525 aaPredicted RBP12.22□□□□□ -0.45
DDX54-206ENST00000549271 MAMDC2Q7Z304 686 aaPredicted RBP12.22□□□□□ -0.45
DDX54-206ENST00000549271 PIM3Q86V86 326 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 SFTPA2Q8IWL1 248 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 TEX19Q8NA77 164 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 FNIP1Q8TF40 1166 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 IQCDQ96DY2 449 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 ZNF641Q96N77 438 aaPredicted RBP12.22□□□□□ -0.45
DDX54-206ENST00000549271 PEBP4Q96S96 227 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 RBM15Q96T37 977 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDX54-206ENST00000549271 SUV39H2Q9H5I1 410 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 LRRC19Q9H756 370 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 PDFQ9HBH1 243 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 RDH14Q9HBH5 336 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 PRDM8Q9NQV8 689 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 LRIT1Q9P2V4 623 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 LUC7L2Q9Y383 392 aaKnown RBP12.22□□□□□ -0.45
DDX54-206ENST00000549271 B3GALT1Q9Y5Z6 326 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 BZW2Q9Y6E2 419 aaKnown RBP12.22□□□□□ -0.45
DDX54-206ENST00000549271 ZFHX3Q15911 3703 aa12.22□□□□□ -0.45
DDX54-206ENST00000549271 A0A087X0T9 212 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 INSIG1O15503 277 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 NUDT21O43809 227 aaKnown RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 CREB3O43889 395 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 CLDN1O95832 211 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 DDAH2O95865 285 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 FAM228BP0C875 321 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 MYBL1P10243 752 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 HTR1BP28222 390 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 MIPP30301 263 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 CASP14P31944 242 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 NDST2P52849 883 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 SRP54P61011 504 aaKnown RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 SEPT6Q14141 434 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 ARHGEF7Q14155 803 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 NFATC4Q14934 902 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 CLPPQ16740 277 aaPredicted RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 DEFB109BQ30KR1 87 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 CRTC2Q53ET0 693 aaPredicted RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 LRRC73Q5JTD7 316 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 ERMARDQ5T6L9 678 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 TCTN3Q6NUS6 607 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 BRAT1Q6PJG6 821 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 RD3Q7Z3Z2 195 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 HEATR4Q86WZ0 1026 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 RCBTB1Q8NDN9 531 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 ATL2Q8NHH9 583 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 ZNF653Q96CK0 615 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 WRAP53Q9BUR4 548 aaKnown RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 APOOQ9BUR5 198 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 SPRY4Q9C004 299 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 TSPY26PQ9H489 355 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 ZNF768Q9H5H4 540 aaKnown RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 MYO1AQ9UBC5 1043 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 UBA2Q9UBT2 640 aaPredicted RBP12.21□□□□□ -0.45
DDX54-206ENST00000549271 PCSK1NQ9UHG2 260 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 PILRAQ9UKJ1 303 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 NENFQ9UMX5 172 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 DGKBQ9Y6T7 804 aa12.21□□□□□ -0.45
DDX54-206ENST00000549271 F8P00451 2351 aa12.21□□□□□ -0.46
DDX54-206ENST00000549271 PDZD2O15018 2839 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 IGHV5-10-1A0A0J9YXX1 117 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 EFCAB7A8K855 629 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 PRAMEF11O60813 436 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 LRCH4O75427 683 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 HOXC4P09017 264 aaPredicted RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 XPAP23025 273 aaPredicted RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 MMP12P39900 470 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 MTM1Q13496 603 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 TDRD12Q587J7 1177 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms