RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GBA3Q9H227 469 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 WDR26Q9H7D7 661 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 TOR4AQ9NXH8 423 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 APOBEC3BQ9UH17 382 aaKnown RBP18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 LOC285095A0A1B0GVY8 99 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 GOLGA6CA6NDK9 693 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 GOLGA6BA6NDN3 693 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 NEMP2A6NFY4 417 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 TMEM202A6NGA9 273 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 SCAMP1O15126 338 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 SIGLEC6O43699 453 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 STK10O94804 968 aaKnown RBP18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 PIRTP0C851 137 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 GOLGA6DP0CG33 693 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 SRP54P61011 504 aaKnown RBP18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 DPTQ07507 201 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 FOXC1Q12948 553 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ALG11Q2TAA5 492 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ANKRD20A2Q5SQ80 823 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ANKRD20A1Q5TYW2 823 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ANKRD20A3Q5VUR7 823 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 KCTD16Q68DU8 428 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ITPRIPL1Q6GPH6 555 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 RAET1GQ6H3X3 334 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 CCDC70Q6NSX1 233 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 LYSMD3Q7Z3D4 306 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 HID1Q8IV36 788 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 RAVER1Q8IY67 606 aaKnown RBP18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 NRSN1Q8IZ57 195 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 PNPLA1Q8N8W4 532 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 OR4C6Q8NH72 309 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ATL2Q8NHH9 583 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 LMX1AQ8TE12 382 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 AP2M1Q96CW1 435 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 PDLIM2Q96JY6 352 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 MRGPRX2Q96LB1 330 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 TEX101Q9BY14 249 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 SLC13A1Q9BZW2 595 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 KCNF1Q9H3M0 494 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 MAGEE1Q9HCI5 957 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 GOLGA6AQ9NYA3 693 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 SPASTQ9UBP0 616 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 KLQ9UEF7 1012 aa18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 APOBEC2Q9Y235 224 aaKnown RBP18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 COL5A1P20908 1838 aaPredicted RBP18.69■□□□□ 0.58
PRPF40B-206ENST00000547764 ENC1O14682 589 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 AQP9O43315 295 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 GCATO75600 419 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 SOD1P00441 154 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 EPOP01588 193 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 KELP23276 732 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 TEAD1P28347 426 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 BLKP51451 505 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 HK3P52790 923 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 MPP3Q13368 585 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 C1orf61Q13536 156 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 PRRT3Q5FWE3 981 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 ZNF765Q7L2R6 523 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 RD3Q7Z3Z2 195 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 NLRP8Q86W28 1048 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 HEATR4Q86WZ0 1026 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 SLC13A5Q86YT5 568 aaPredicted RBP18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 IPMKQ8NFU5 416 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 OR56A4Q8NGH8 313 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 SLC35B2Q8TB61 432 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 CCHCR1Q8TD31 782 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 EID2BQ96D98 161 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 SPATA13Q96N96 652 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 GORASP1Q9BQQ3 440 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 LRRC61Q9BV99 259 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 TLR10Q9BXR5 811 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 CARD9Q9H257 536 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 ZFYVE1Q9HBF4 777 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 NLGN3Q9NZ94 848 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 SHOC2Q9UQ13 582 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 CSNK1G3Q9Y6M4 447 aa18.68■□□□□ 0.58
PRPF40B-206ENST00000547764 PDE2AO00408 941 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 ZNF189O75820 626 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 ANXA9O76027 345 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 RASGRP1O95267 797 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 TOP3BO95985 862 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 MYCLP1P12525 358 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 CHRNA4P43681 627 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 GPR1P46091 355 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 SPINT3P49223 89 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 CDK3Q00526 305 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 DNAJC3Q13217 504 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 PROX2Q3B8N5 592 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 SLC25A41Q8N5S1 370 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 FAM71DQ8N9W8 422 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 OR1E3Q8WZA6 343 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 PDXPQ96GD0 296 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 TBATAQ96M53 351 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 WDR24Q96S15 920 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 AGAP2Q99490 1192 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 RIOK2Q9BVS4 552 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 FGF22Q9HCT0 170 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 MRPL40Q9NQ50 206 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms