RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CLPTM1O96005 669 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 CLTBP09497 229 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 FOXM1Q08050 763 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 SLC10A7Q0GE19 358 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 SMARCB1Q12824 385 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 GRIK2Q13002 908 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 SERINC3Q13530 473 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 BORAQ6PGQ7 559 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 FAM43BQ6ZT52 329 aaPredicted RBP23.25■■□□□ 1.31
FOXA1-202ENST00000545425 BRSK1Q8TDC3 778 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 C19orf60Q96EN9 201 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 MUC13Q9H3R2 512 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 PFDN4Q9NQP4 134 aa23.25■■□□□ 1.31
FOXA1-202ENST00000545425 NEMP2A6NFY4 417 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 OR6C75A6NL08 312 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 ARVCFO00192 962 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 AURKAO14965 403 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 IGLV3-27P01718 113 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 SMIM18P0DKX4 95 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 KCNA5P22460 613 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 POLD3Q15054 466 aaPredicted RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 AP1ARQ63HQ0 302 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 LILRA2Q8N149 483 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 PABPC5Q96DU9 382 aaKnown RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 PRICKLE1Q96MT3 831 aaPredicted RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 TCF12Q99081 682 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 CYP4F12Q9HCS2 524 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 ABI2Q9NYB9 513 aaPredicted RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 UXTQ9UBK9 157 aaPredicted RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 VPS9D1Q9Y2B5 631 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 E7ENX8 843 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 CD1DP15813 335 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 ATP6V0D1P61421 351 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 DSC2Q02487 901 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 MAP7D1Q3KQU3 841 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 UNC50Q53HI1 259 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 ZNF789Q5FWF6 425 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 PTAR1Q7Z6K3 402 aaPredicted RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 RNF135Q8IUD6 432 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 PACRGLQ8N7B6 248 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 HASPINQ8TF76 798 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 MARK4Q96L34 752 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 ZNF597Q96LX8 424 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 KLHL32Q96NJ5 620 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 SLC2A11Q9BYW1 496 aa23.24■■□□□ 1.31
FOXA1-202ENST00000545425 TLR8Q9NR97 1041 aaKnown RBP23.24■■□□□ 1.31
FOXA1-202ENST00000545425 J3KR12 359 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 FBP2O00757 339 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 CLGNO14967 610 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 PRAMEF11O60813 436 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 SUPT7LO94864 414 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 MATN4O95460 622 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 PSMA3P25788 255 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 TXNL4AP83876 142 aaKnown RBP23.23■■□□□ 1.31
FOXA1-202ENST00000545425 BNIP2Q12982 314 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 LSAMPQ13449 338 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 TYSND1Q2T9J0 566 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 HMGCLL1Q8TB92 370 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 ANKRD49Q8WVL7 239 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 CDK5RAP1Q96SZ6 601 aaKnown RBP23.23■■□□□ 1.31
FOXA1-202ENST00000545425 HAUS8Q9BT25 410 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 ALG9Q9H6U8 611 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 SUDS3Q9H7L9 328 aaPredicted RBP23.23■■□□□ 1.31
FOXA1-202ENST00000545425 ACSS2Q9NR19 701 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 ARMC1Q9NVT9 282 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 PTTG2Q9NZH5 202 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.23■■□□□ 1.316e-6■□□□□ 11.1
FOXA1-202ENST00000545425 DNAH12Q6ZR08 3092 aa23.23■■□□□ 1.31
FOXA1-202ENST00000545425 AQP12BA6NM10 295 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 CD3EAPO15446 510 aaKnown RBP23.22■■□□□ 1.31
FOXA1-202ENST00000545425 HAPLN1P10915 354 aaPredicted RBP23.22■■□□□ 1.31
FOXA1-202ENST00000545425 CD1EP15812 388 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 CES1P23141 567 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 YWHAQP27348 245 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 PGGT1BP53609 377 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 CDKN2DP55273 166 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 C5orf22Q49AR2 442 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 AQP12AQ8IXF9 295 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 PSMG2Q969U7 264 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 EME1Q96AY2 570 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 TMEM39AQ9NV64 488 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 GID8Q9NWU2 228 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 RANBP2P49792 3224 aaKnown RBP23.22■■□□□ 1.31
FOXA1-202ENST00000545425 TRIOBPQ9H2D6 2365 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 ARHGAP10A1A4S6 786 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 KIAA0355O15063 1070 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 CD9P21926 228 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 PGFP49763 221 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 UGT3A2Q3SY77 523 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 PABPC1LQ4VXU2 614 aaKnown RBP23.22■■□□□ 1.31
FOXA1-202ENST00000545425 GPR158Q5T848 1215 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 FBXL22Q6P050 247 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 KDELC2Q7Z4H8 507 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 SLC43A3Q8NBI5 491 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 PHF21BQ96EK2 531 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 SPATA17Q96L03 361 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.22■■□□□ 1.31
FOXA1-202ENST00000545425 LZTS1Q9Y250 596 aa23.22■■□□□ 1.31
FOXA1-202ENST00000545425 ARIH1Q9Y4X5 557 aaPredicted RBP23.22■■□□□ 1.31
FOXA1-202ENST00000545425 TYW5A2RUC4 315 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms