RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CYP3A43Q9HB55 503 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 LRRC4Q9HBW1 653 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 PCDH12Q9NPG4 1184 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TNFRSF10DQ9UBN6 386 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 HMGXB4Q9UGU5 601 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 SARDHQ9UL12 918 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 ZFR2Q9UPR6 939 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 NAALADL1Q9UQQ1 740 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 ENTPD4Q9Y227 616 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 SLC5A6Q9Y289 635 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 RNF215Q9Y6U7 377 aa4.15□□□□□ -1.75
SNHG1-220ENST00000544550 TEP1Q99973 2627 aaKnown RBP4.15□□□□□ -1.75
SNHG1-220ENST00000544550 CABIN1Q9Y6J0 2220 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 COL12A1Q99715 3063 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 A0A1B0GTL3 188 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 GOLGA6L7A0A1B0GV03 622 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 TCRBV16S1A1N1A0A5B0 115 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 C7orf72A4D263 438 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 POM121BA6NF01 834 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 TMEM110-MUSTN1A8MSY1 372 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 FADS2P1A8MWK0 482 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 KPNA3O00505 521 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 INPP4BO15327 924 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 NKX2-8O15522 239 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 MSI1O43347 362 aaKnown RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 LRCH4O75427 683 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 GCATO75600 419 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 RFPL1O75677 317 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 CRTAMO95727 393 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 CPNE6O95741 557 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PAK4O96013 591 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 LDLRP01130 860 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 IGLV3-27P01718 113 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 C4BPAP04003 597 aaKnown RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 NAT1P18440 290 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 STK19P49842 368 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 NEK3P51956 506 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PLK1P53350 603 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 METAP1P53582 386 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 TBX4P57082 545 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PFN3P60673 137 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PPARDQ03181 441 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 ABHD18Q0P651 414 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 EIF2B5Q13144 721 aaKnown RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 ARHGEF7Q14155 803 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 EIF2S3LQ2VIR3 472 aaKnown RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 FSCBQ5H9T9 825 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 CERCAMQ5T4B2 595 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 DCAF12Q5T6F0 453 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 RRAGBQ5VZM2 374 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 BSPRYQ5W0U4 402 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 HLA-DQA1Q5Y7H0 255 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 SEL1L3Q68CR1 1132 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 MSANTD2Q6P1R3 559 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 MACC1Q6ZN28 852 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 MMS22LQ6ZRQ5 1243 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 TMPRSS9Q7Z410 1059 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PIGZQ86VD9 579 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 CPNE8Q86YQ8 564 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 APCDD1Q8J025 514 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 RBFAQ8N0V3 343 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 NLGN4XQ8N0W4 816 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 SIX6OS1Q8N1H7 587 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 SCML4Q8N228 414 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 CCDC150Q8NCX0 1101 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 AGBL5Q8NDL9 886 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 NLGN4YQ8NFZ3 816 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 ATL2Q8NHH9 583 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PCDH19Q8TAB3 1148 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 STARD8Q92502 1023 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 DNAJC19Q96DA6 116 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 ARHGEF26Q96DR7 871 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 MAP6Q96JE9 813 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 SERPINB11Q96P15 392 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 ZPBPQ9BS86 351 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 C1QTNF7Q9BXJ2 289 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 ULBP1Q9BZM6 244 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 EDEM3Q9BZQ6 932 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 LRRC27Q9C0I9 530 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 CNGB3Q9NQW8 809 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 AGPAT3Q9NRZ7 376 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PANK4Q9NVE7 773 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 GPR34Q9UPC5 381 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 MAPRE3Q9UPY8 281 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 PCDHA9Q9Y5H5 950 aa4.14□□□□□ -1.75
SNHG1-220ENST00000544550 TNPO3Q9Y5L0 923 aaKnown RBP4.14□□□□□ -1.75
SNHG1-220ENST00000544550 COL27A1Q8IZC6 1860 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 FBN2P35556 2912 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ARHGAP10A1A4S6 786 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TCAF2A6NFQ2 919 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TCP11X1B4DZS4 312 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 B4E171 279 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 F5H5T6 163 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 XPO1O14980 1071 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CASC3O15234 703 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TGFB1I1O43294 461 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TSPAN6O43657 245 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 AP1G1O43747 822 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 NUDT21O43809 227 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms