RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RGS11O94810 467 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 PRKCGP05129 697 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 SLC15A1P46059 708 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 PPP3CCP48454 512 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 MFAP4P55083 255 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 RPS13P62277 151 aaKnown RBP3.83□□□□□ -1.8
SCFD1-207ENST00000544052 ITGADQ13349 1161 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 LAMB3Q13751 1172 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 ARHGEF6Q15052 776 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 RASA2Q15283 850 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 C2orf68Q2NKX9 166 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 SPECC1Q5M775 1068 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 C6orf10Q5SRN2 563 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 GPR139Q6DWJ6 353 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 UBE2Q1Q7Z7E8 422 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 TICAM1Q8IUC6 712 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 FAM185AQ8N0U4 392 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 IL17RCQ8NAC3 791 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 HJURPQ8NCD3 748 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-207ENST00000544052 HUS1BQ8NHY5 278 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 SNAPC3Q92966 411 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 SLC22A18Q96BI1 424 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 MSI2Q96DH6 328 aaKnown RBP3.83□□□□□ -1.8
SCFD1-207ENST00000544052 SIGLEC11Q96RL6 698 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 POLDIP3Q9BY77 421 aaKnown RBP3.83□□□□□ -1.8
SCFD1-207ENST00000544052 IFIH1Q9BYX4 1025 aaKnown RBP3.83□□□□□ -1.8
SCFD1-207ENST00000544052 B3GNT4Q9C0J1 378 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 SIL1Q9H173 461 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 PLK3Q9H4B4 646 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 CEPT1Q9Y6K0 416 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 FAM169AQ9Y6X4 670 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 PPLO60437 1756 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 PTPRUQ92729 1446 aa3.83□□□□□ -1.8
SCFD1-207ENST00000544052 KIF1BO60333 1816 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM94Q12767 1356 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 NHSL1Q5SYE7 1610 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 NEXMIFQ5QGS0 1516 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 H3BQ06 376 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 STMND1H3BQB6 276 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PRPF4O43172 522 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 KIF1CO43896 1103 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SLC25A12O75746 678 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 TPPPO94811 219 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 EPHB2P29323 1055 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 DCTDP32321 178 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 NRIP1P48552 1158 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 CAMPP49913 170 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 HSD17B4P51659 736 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 AIMP2Q13155 320 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM266Q2M3C6 531 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SUPT20HL1Q3ZLR7 823 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 LRIF1Q5T3J3 769 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 DENND5BQ6ZUT9 1274 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PRPF39Q86UA1 669 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 DENND6AQ8IWF6 608 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 TEX11Q8IYF3 940 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 ZDHHC23Q8IYP9 409 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 ZBTB2Q8N680 514 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 OR14L1PQ8NHC6 308 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 DDB2Q92466 427 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 NELL1Q92832 810 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PPP1R13BQ96KQ4 1090 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 OR2A14Q96R47 310 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 KLHL4Q9C0H6 718 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PCED1AQ9H1Q7 454 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SLITRK6Q9H5Y7 841 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 MAP6D1Q9H9H5 199 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SLC28A3Q9HAS3 691 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 ZCCHC17Q9NP64 241 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 RNF146Q9NTX7 359 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 MRPL15Q9P015 296 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 R3HDM2Q9Y2K5 976 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SHPRHQ149N8 1683 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PASKQ96RG2 1323 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 LRP6O75581 1613 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 OR2A25A4D2G3 310 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PPP6CO00743 305 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 NDUFS3O75489 264 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 ZNF182P17025 639 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 CALD1Q05682 793 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 FOXF2Q12947 444 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 LPIN1Q14693 890 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 DAZAP2Q15038 168 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 CDONQ4KMG0 1287 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM198Q66K66 360 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 AACSQ86V21 672 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 KBTBD6Q86V97 674 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 ZMAT2Q96NC0 199 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 WDR83Q9BRX9 315 aaKnown RBP3.82□□□□□ -1.8
SCFD1-207ENST00000544052 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 OGFRQ9NZT2 677 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 PADI1Q9ULC6 663 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 COG5Q9UP83 839 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SLC4A4Q9Y6R1 1079 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 RIMS2Q9UQ26 1411 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 SETBP1Q9Y6X0 1596 aa3.82□□□□□ -1.8
SCFD1-207ENST00000544052 UTYO14607 1347 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 ROCK1Q13464 1354 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms