RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	LRRC14	Q15048	493 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	TMEM259	Q4ZIN3	620 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	CES3	Q6UWW8	571 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	ZDHHC24	Q6UX98	284 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	NRSN1	Q8IZ57	195 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	MPP5	Q8N3R9	675 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	ZCCHC9	Q8N567	271 aa	Known RBP	10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	GPR161	Q8N6U8	529 aa	Known RBP	10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	PRSS33	Q8NF86	280 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	OR13C4	Q8NGS5	318 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	FBXO25	Q8TCJ0	367 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	AP2M1	Q96CW1	435 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	STAMBPL1	Q96FJ0	436 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	DTD2	Q96FN9	168 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	DNAJC1	Q96KC8	554 aa	Known RBP	10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	COQ10A	Q96MF6	247 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	RANBP9	Q96S59	729 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	RIOK2	Q9BVS4	552 aa	Known RBP	10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	SPATA16	Q9BXB7	569 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	IRF2BPL	Q9H1B7	796 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	EPC1	Q9H2F5	836 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	SAYSD1	Q9NPB0	183 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	FZD3	Q9NPG1	666 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	GDF3	Q9NR23	364 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	CHRAC1	Q9NRG0	131 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	AASDHPPT	Q9NRN7	309 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	KCTD5	Q9NXV2	234 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	IL17C	Q9P0M4	197 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	EIF2B4	Q9UI10	523 aa	Known RBP	10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	DMTF1	Q9Y222	760 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	TCAF1	Q9Y4C2	921 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545	CACNA1I	Q9P0X4	2223 aa		10.14	□□□□□ -0.79
CPSF7-221	ENST00000543545		A0A1W2PPC4	97 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PRAMEF26	H0Y7S4	382 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CCL22	O00626	93 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	FPGT	O14772	594 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	LDB2	O43679	373 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	LILRB5	O75023	590 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PPFIA2	O75334	1257 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	BANF1	O75531	89 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	BPI	P17213	487 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	SPAM1	P38567	509 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	HADHA	P40939	763 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	GPR1	P46091	355 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CARS	P49589	748 aa	Known RBP	10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PTPN5	P54829	565 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CLDN2	P57739	230 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	FGL2	Q14314	439 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ERCC6L	Q2NKX8	1250 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	WSCD2	Q2TBF2	565 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	MSS51	Q4VC12	460 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	SPDYC	Q5MJ68	293 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	TSTD2	Q5T7W7	516 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ZDHHC20	Q5W0Z9	365 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PMS2CL	Q68D20	193 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	RAET1G	Q6H3X3	334 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ESRP1	Q6NXG1	681 aa	Known RBP	10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CEP128	Q6ZU80	1094 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	TECPR1	Q7Z6L1	1165 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ANKMY2	Q8IV38	441 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	SLC41A1	Q8IVJ1	513 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PALM2	Q8IXS6	379 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ZBED8	Q8IZ13	594 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CBARP	Q8N350	705 aa	Predicted RBP	10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	OTUD6B	Q8N6M0	293 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	GPR26	Q8NDV2	337 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	OR6P1	Q8NGX9	317 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PYROXD1	Q8WU10	500 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	STYX	Q8WUJ0	223 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PTCD2	Q8WV60	388 aa	Known RBP	10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ASB12	Q8WXK4	309 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	SEC14L1	Q92503	715 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	PIGK	Q92643	395 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	SCAMP4	Q969E2	229 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	EID2B	Q96D98	161 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CFAP36	Q96G28	342 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	FAM129A	Q9BZQ8	928 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	FOXP3	Q9BZS1	431 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CDH19	Q9H159	772 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	ABCG8	Q9H221	673 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	FKBPL	Q9UIM3	349 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	NFU1	Q9UMS0	254 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	SOX13	Q9UN79	622 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CHMP2B	Q9UQN3	213 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	CA5B	Q9Y2D0	317 aa		10.13	□□□□□ -0.79
CPSF7-221	ENST00000543545	MUC3A	Q02505	3323 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	GLYATL1P3	A0A0U1RQE8	302 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	MROH6	A6NGR9	719 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	RAD51B	O15315	384 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	TP73	O15350	636 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	EIF3H	O15372	352 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	LAT	O43561	262 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	POLB	P06746	335 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	GNS	P15586	552 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	PGAM1	P18669	254 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	PAM	P19021	973 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	ITPKA	P23677	461 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	NMBR	P28336	390 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	ELK3	P41970	407 aa		10.12	□□□□□ -0.79
CPSF7-221	ENST00000543545	MAGEA3	P43357	314 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms