RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 KCTD3Q9Y597 815 aa18.24■□□□□ 0.51
RAP1B-229ENST00000543393 MRPS18BQ9Y676 258 aaKnown RBP18.24■□□□□ 0.51
RAP1B-229ENST00000543393 PRAMEF11O60813 436 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 VPS4BO75351 444 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 GNLYP22749 145 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ERCC5P28715 1186 aaPredicted RBP18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ADCY8P40145 1251 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ACTR1BP42025 376 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 POLD2P49005 469 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ACTR1AP61163 376 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 POLR2LP62875 67 aaKnown RBP18.23■□□□□ 0.51
RAP1B-229ENST00000543393 CDK3Q00526 305 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 TCTN3Q6NUS6 607 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ARHGAP22Q7Z5H3 698 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ZPBPQ9BS86 351 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 TRIT1Q9H3H1 467 aaKnown RBP18.23■□□□□ 0.51
RAP1B-229ENST00000543393 APMAPQ9HDC9 416 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 PRDM8Q9NQV8 689 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 FBXO8Q9NRD0 319 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 B4GALT6Q9UBX8 382 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 VPS4AQ9UN37 437 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 PLEKHM1Q9Y4G2 1056 aa18.23■□□□□ 0.51
RAP1B-229ENST00000543393 ITPR2Q14571 2701 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 MKRN2OSH3BPM6 223 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 TRAFD1O14545 582 aaPredicted RBP18.22■□□□□ 0.51
RAP1B-229ENST00000543393 PALMO75781 387 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 RFC1P35251 1148 aaPredicted RBP18.22■□□□□ 0.51
RAP1B-229ENST00000543393 STAT5AP42229 794 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 COPB1P53618 953 aaKnown RBP18.22■□□□□ 0.51
RAP1B-229ENST00000543393 MAN2A1Q16706 1144 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 KLHDC7AQ5VTJ3 777 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 CAPRIN2Q6IMN6 1127 aaKnown RBP18.22■□□□□ 0.51
RAP1B-229ENST00000543393 SCYL2Q6P3W7 929 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 ASB18Q6ZVZ8 466 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 CCDC13Q8IYE1 715 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 OR10G6Q8NH81 332 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 SLC30A5Q8TAD4 765 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 SSC4DQ8WTU2 575 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 SLC20A1Q8WUM9 679 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 C11orf70Q9BRQ4 267 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 SLC17A4Q9Y2C5 497 aa18.22■□□□□ 0.51
RAP1B-229ENST00000543393 TEP1Q99973 2627 aaKnown RBP18.22■□□□□ 0.51
RAP1B-229ENST00000543393 RP1L1Q8IWN7 2480 aaPredicted RBP18.21■□□□□ 0.51
RAP1B-229ENST00000543393 TRBV23OR9-2A0A075B6M9 112 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 DLGAP3O95886 979 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 CYP1A1P04798 512 aaPredicted RBP18.21■□□□□ 0.51
RAP1B-229ENST00000543393 KRT3P12035 628 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 GPD1P21695 349 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 F8A1P23610 371 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 FASLGP48023 281 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 CNGA3Q16281 694 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 DENND2CQ68D51 928 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 CELF6Q96J87 481 aaKnown RBP18.21■□□□□ 0.51
RAP1B-229ENST00000543393 NSMCE3Q96MG7 304 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 SLC38A3Q99624 504 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 NAA15Q9BXJ9 866 aaKnown RBP18.21■□□□□ 0.51
RAP1B-229ENST00000543393 NDST4Q9H3R1 872 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 NOCTQ9UK39 431 aaKnown RBP18.21■□□□□ 0.51
RAP1B-229ENST00000543393 RPS6KL1Q9Y6S9 549 aa18.21■□□□□ 0.51
RAP1B-229ENST00000543393 GOLGA6CA6NDK9 693 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 GOLGA6BA6NDN3 693 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 FGF10O15520 208 aaPredicted RBP18.2■□□□□ 0.5
RAP1B-229ENST00000543393 IVLP07476 585 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 GOLGA6DP0CG33 693 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
RAP1B-229ENST00000543393 NDST2P52849 883 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 DOK6Q6PKX4 331 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 WDR74Q6RFH5 385 aaPredicted RBP18.2■□□□□ 0.5
RAP1B-229ENST00000543393 ESX1Q8N693 406 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 GALNT11Q8NCW6 608 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 SLC37A2Q8TED4 501 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 CINPQ9BW66 212 aaPredicted RBP18.2■□□□□ 0.5
RAP1B-229ENST00000543393 SLC39A8Q9C0K1 460 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 GOLGA6AQ9NYA3 693 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 FZD10Q9ULW2 581 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 PCDHB3Q9Y5E6 796 aa18.2■□□□□ 0.5
RAP1B-229ENST00000543393 F8VZ95 297 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 POLR1CO15160 346 aaPredicted RBP18.19■□□□□ 0.5
RAP1B-229ENST00000543393 FURINP09958 794 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 RNF224P0DH78 156 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 UCHL3P15374 230 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 ETV3P41162 512 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 NOP2P46087 812 aaKnown RBP18.19■□□□□ 0.5
RAP1B-229ENST00000543393 SCNN1BP51168 640 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 NSUN2Q08J23 767 aaKnown RBP eCLIP18.19■□□□□ 0.5
RAP1B-229ENST00000543393 PTP4A2Q12974 167 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 ERV3-1Q14264 604 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 VWA3BQ502W6 1294 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 MIIPQ5JXC2 388 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 RAET1GQ6H3X3 334 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 WDR59Q6PJI9 974 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 ZNF677Q86XU0 584 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 EFCAB3Q8N7B9 438 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 DTD2Q96FN9 168 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 OR2M4Q96R27 311 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 SELENOOQ9BVL4 669 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 KCTD5Q9NXV2 234 aa18.19■□□□□ 0.5
RAP1B-229ENST00000543393 ARHGAP42A6NI28 874 aa18.18■□□□□ 0.5
RAP1B-229ENST00000543393 TTLL8A6PVC2 850 aa18.18■□□□□ 0.5
RAP1B-229ENST00000543393 CCP110O43303 1012 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms