RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CGB2Q6NT52 195 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 RAPH1Q70E73 1250 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 C12orf40Q86WS4 652 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FAM45AQ8TCE6 357 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FRS2Q8WU20 508 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 TCF12Q99081 682 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ELAC2Q9BQ52 826 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 IL17CQ9P0M4 197 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 TMEM216Q9P0N5 145 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 SLCO3A1Q9UIG8 710 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 PHTF1Q9UMS5 762 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 MYOFQ9NZM1 2061 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ATXN2Q99700 1313 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 ENO4A6NNW6 628 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 TRIM24O15164 1050 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 TULP3O75386 442 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ATP5BP06576 529 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 CTPS1P17812 591 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 NNMTP40261 264 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 SLC12A2P55011 1212 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 TAS2R39P59534 338 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 CDKN3Q16667 212 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ACCSLQ4AC99 568 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 RBM20Q5T481 1227 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 RNF187Q5TA31 235 aaPredicted RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 HECTD2Q5U5R9 776 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ATG16L1Q676U5 607 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 C16orf46Q6P387 395 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 VITQ6UXI7 678 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 DPY19L3Q6ZPD9 716 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FAM47EQ6ZV65 393 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 Q6ZVU0 165 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 SPATA21Q7Z572 469 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ZSWIM9Q86XI8 627 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 NUDCD3Q8IVD9 361 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 CEP97Q8IW35 865 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 PLD6Q8N2A8 252 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 OR2A12Q8NGT7 310 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 RDH11Q8TC12 318 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 TSNARE1Q96NA8 513 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 GPR63Q9BZJ6 419 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 S1PR5Q9H228 398 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 SUV39H2Q9H5I1 410 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ECT2Q9H8V3 914 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ZFP14Q9HCL3 533 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 CLEC1BQ9P126 229 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FKBPLQ9UIM3 349 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 CDH22Q9UJ99 828 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 MID2Q9UJV3 735 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 ACOT9Q9Y305 439 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 PKP3Q9Y446 797 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 BPTFQ12830 3046 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 PHGDHO43175 533 aaKnown RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 WISP3O95389 354 aaPredicted RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 SLC4A1P02730 911 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 DLDP09622 509 aaKnown RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 ALPIP09923 528 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 MC4RP32245 332 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 HNF1BP35680 557 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 RECQLP46063 649 aaPredicted RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 PCLAFQ15004 111 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 PTPRNQ16849 979 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 TSNAXIP1Q2TAA8 658 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 AARS2Q5JTZ9 985 aaKnown RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 ATAT1Q5SQI0 421 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 GRAMD4Q6IC98 578 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 TANGO2Q6ICL3 276 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 CPA6Q8N4T0 437 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 ANKS4BQ8N8V4 417 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 CCDC63Q8NA47 563 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 MCCC1Q96RQ3 725 aaPredicted RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 OLFM1Q99784 485 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 MECRQ9BV79 373 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 EBF3Q9H4W6 596 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 ZDHHC6Q9H6R6 413 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 POPDC3Q9HBV1 291 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 SLCO1B3Q9NPD5 702 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 HPS4Q9NQG7 708 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 MYO7AQ13402 2215 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 TSPAN11A1L157 253 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 NEFHP12036 1026 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 SAT1P21673 171 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 FDXRP22570 491 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 SLC26A3P40879 764 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 SUOXP51687 545 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 KPNA2P52292 529 aaKnown RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 XIAPP98170 497 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 PEX6Q13608 980 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 EIF4HQ15056 248 aaKnown RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 PTPRRQ15256 657 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 CES5AQ6NT32 575 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 C6orf89Q6UWU4 347 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 GDPD4Q6W3E5 623 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms