RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 CLEC20AQ6ZU45 233 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 PAQR9Q6ZVX9 377 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 GOLM1Q8NBJ4 401 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 DPF3Q92784 378 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 CNDP2Q96KP4 475 aaKnown RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 CSF3RQ99062 836 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 HEPHQ9BQS7 1158 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 TDRD1Q9BXT4 1180 aaKnown RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 LHPPQ9H008 270 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 TKTL2Q9H0I9 626 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 WDCPQ9H6R7 721 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 C8orf4Q9NR00 106 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 ANAPC2Q9UJX6 822 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 PSME2Q9UL46 239 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 LOC285556D6RIA3 1793 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 SYNCRIPO60506 623 aaKnown RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 HUS1O60921 280 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 ALBP02768 609 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 HOXA11P31270 313 aaPredicted RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 GSK3BP49841 420 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 GMPSP49915 693 aaPredicted RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 AIF1P55008 147 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 UNC50Q53HI1 259 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 SFRP1Q8N474 314 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 TMCO5AQ8N6Q1 288 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 SMG8Q8ND04 991 aaKnown RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 EDEM1Q92611 657 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 ZNF419Q96HQ0 510 aaPredicted RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 COLEC11Q9BWP8 271 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 ING2Q9H160 280 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 NXF3Q9H4D5 531 aaKnown RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 PIF1Q9H611 641 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 MRM3Q9HC36 420 aaKnown RBP23.71■■□□□ 1.39
SHD-201ENST00000543264 TREX1Q9NSU2 369 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 GJA3Q9Y6H8 435 aa23.71■■□□□ 1.39
SHD-201ENST00000543264 PIRO00625 290 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 PIP5K1BO14986 540 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 ZNF286BP0CG31 522 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 NOMO2Q5JPE7 1267 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 GPR158Q5T848 1215 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 TMEM53Q6P2H8 277 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 PNPT1Q8TCS8 783 aaKnown RBP23.7■■□□□ 1.38
SHD-201ENST00000543264 ZC3H15Q8WU90 426 aaKnown RBP23.7■■□□□ 1.38
SHD-201ENST00000543264 TAMM41Q96BW9 452 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 ITPKCQ96DU7 683 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 CORO1BQ9BR76 489 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 TRMOQ9BU70 441 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 FSD1LQ9BXM9 530 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 ALG2Q9H553 416 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 INTS10Q9NVR2 710 aaKnown RBP23.7■■□□□ 1.38
SHD-201ENST00000543264 SEPT3Q9UH03 358 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 PCDHA9Q9Y5H5 950 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 ANXA9O76027 345 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 SEC14L2O76054 403 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 RECQL4O94761 1208 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 NR4A1P22736 598 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 AXLP30530 894 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 CCDC92Q53HC0 331 aaPredicted RBP23.7■■□□□ 1.38
SHD-201ENST00000543264 KCTD14Q9BQ13 255 aaPredicted RBP23.7■■□□□ 1.38
SHD-201ENST00000543264 ADNPQ9H2P0 1102 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 GLOD4Q9HC38 313 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 DAPK2Q9UIK4 370 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 UBQLN1Q9UMX0 589 aaKnown RBP23.7■■□□□ 1.38
SHD-201ENST00000543264 SBF1O95248 1867 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 PLXNA1Q9UIW2 1896 aa23.7■■□□□ 1.38
SHD-201ENST00000543264 USP17L7P0C7H9 530 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 CES1P23141 567 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 JAK1P23458 1154 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 FOXA1P55317 472 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 BROXQ5VW32 411 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 LDB1Q86U70 411 aaPredicted RBP23.69■■□□□ 1.38
SHD-201ENST00000543264 TBC1D21Q8IYX1 336 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 TUBGCP3Q96CW5 907 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 MID1IP1Q9NPA3 183 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 DGKBQ9Y6T7 804 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 TCRBV5S2A0A599 114 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 KRBA1A5PL33 1030 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 H3BMM5 538 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 CACNG3O60359 315 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 LIPEQ05469 1076 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 NFYCQ13952 458 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 HECTD2Q5U5R9 776 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 KIAA0930Q6ICG6 404 aaPredicted RBP23.69■■□□□ 1.38
SHD-201ENST00000543264 ARMCX2Q7L311 632 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 BTLAQ7Z6A9 289 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 RYBPQ8N488 228 aaPredicted RBP23.69■■□□□ 1.38
SHD-201ENST00000543264 PDZD8Q8NEN9 1154 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 RAB2BQ8WUD1 216 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 SGCDQ92629 289 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 TMEM125Q96AQ2 219 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 VPS33AQ96AX1 596 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 NRBF2Q96F24 287 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 UBXN10Q96LJ8 280 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 SLC30A3Q99726 388 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 BEGAINQ9BUH8 593 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 RAD21L1Q9H4I0 556 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 USP22Q9UPT9 525 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 B3GNT3Q9Y2A9 372 aa23.69■■□□□ 1.38
SHD-201ENST00000543264 SHMT2P34897 504 aa23.68■■□□□ 1.38
SHD-201ENST00000543264 CASP2P42575 452 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms